myRT

myRT report for GCA_000693735.1_Kleb_pneu_CHS_38_V1

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Seq: KK737072.1 Klebsiella pneumoniae CHS 38 genomic scaffold aedZb-supercont1.1, whole genome shotgun sequence (2900705 bp)
Overview 1 RT 1: 883339-889822 bp Neighborhood of RT #1 [883339, 889824] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 883339-884397 bp Feature: domain Description: YccC Location: 883345-884383 bp Feature: domain Description: YccC Location: 883345-884383 bp Feature: gene Location: 884496-884969 bp Feature: domain Description: PRK10016 Location: 884499-884958 bp Feature: domain Description: PRK1 001 6 Location: 884499-884958 bp Feature: gene Location: 885051-886538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885456-886146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885456-8861 46 bp Feature: gene Location: 887056-888219 bp Feature: domain Description: dacD Location: 887059-888214 bp Feature: domain Description: dacD Location: 887059-88821 4 bp Feature: gene Location: 888400-889824 bp Feature: domain Description: SbcB Location: 888406-889822 bp Feature: domain Description: SbcB Location: 888406-889822 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KK737074.1 Klebsiella pneumoniae CHS 38 genomic scaffold aedZb-supercont1.3, whole genome shotgun sequence (481770 bp)
Overview 1 RT 1: 1-5073 bp Neighborhood of RT #1 [1, 5075] RVT-GII PRK10276 umuC Feature: gene Location: 1-427 bp Feature: gene Location: 1822-3309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2227-2917 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 2 7-2 917 bp Feature: gene Location: 3302-3808 bp Feature: domain Description: PRK10276 Location: 3392-3803 bp Feature: domain Description: PRK102 76 Location: 3392 -3803 bp Feature: gene Location: 3810-5075 bp Feature: domain Description: umuC Location: 3813-5073 bp Feature: domain Description: umuC Location: 3813-5073 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KK737078.1 Klebsiella pneumoniae CHS 38 genomic scaffold aedZb-supercont1.7, whole genome shotgun sequence (77755 bp)
Overview 1 RT 1: 74922-77753 bp Neighborhood of RT #1 [74922, 77755] umuC PRK10276 RVT-GII Feature: gene Location: 74922-76193 bp Feature: domain Description: umuC Location: 74925-76188 bp Feature: domain Description: umuC Location: 74925-76188 bp Feature: gene Location: 76193-76618 bp Feature: domain Description: PRK10276 Location: 76196-76604 bp Feature: domain Description: PRK10276 Location: 76196-76604 bp Feature: gene Location: 77021-77755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77426-77753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77426-77753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: KK737073.1 Klebsiella pneumoniae CHS 38 genomic scaffold aedZb-supercont1.2, whole genome shotgun sequence (1552750 bp)
Overview 1 RT 1: 585216-589171 bp 2 RT 2: 1028404-1032982 bp 3 RT 3: 1372499-1377917 bp Neighborhood of RT #1 [585216, 589272] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1028404, 1032982] YbjK int RVT-GII Neighborhood of RT #3 [1372499, 1377919] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 585216-585947 bp Feature: domain Description: Laminin_G_3 Location: 585537-585891 bp Feature: domain Description: Laminin_G_3 Location: 585537-585891 bp Feature: gene Location: 585944-586153 bp Feature: gene Location: 586603-588090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 587008-587698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 587008-587698 bp Feature: gene Location: 588716-588955 bp Feature: gene Location: 588955-589272 bp Feature: domain Description: PRK10276 Location: 588961-589075 bp Feature: domain Description: PRK10276 Location: 588961-589075 bp Feature: domain Description: PRK10276 Location: 589102-589171 bp Feature: domain Description: PRK10276 Location: 589102-589171 bp Feature: gene Location: 1028404-1028967 bp Feature: domain Description: YbjK Location: 1028410-1028947 bp Feature: domain Description: YbjK Location: 10284 10-102894 7 bp Feature: gene Location: 1029090-1030142 bp Feature: domain Description: int Location: 1029093-1030092 bp Feature: domain Description: int Location: 1029093-1030092 bp Feature: gene Location: 1030558-1032045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1030963-1031653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1030963-1031653 bp Feature: gene Location: 1032224-1032570 bp Feature: gene Location: 1032725-1032982 bp Feature: gene Location: 1372499-1373638 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1372682-1373582 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1372682-1373582 bp Feature: gene Location: 1373809-1374051 bp Feature: domain Description: DinI Location: 1373860-1374040 bp Feature: domain Description: DinI Location: 1373860-1374 04 0 bp Feature: gene Location: 1374666-1376153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1375071-1375761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1375071-1375761 bp Feature: gene Location: 1376232-1376651 bp Feature: domain Description: PRK10276 Location: 1376235-1376646 bp Feature: domain Description: PRK10276 Location: 1376235-137664 6 bp Feature: gene Location: 1376654-1377919 bp Feature: domain Description: umuC Location: 1376657-1377917 bp Feature: domain Description: umuC Location: 1376657-1377917 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)