myRT

myRT report for GCA_000693835.1_Kleb_pneu_CHS_44_V1

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Seq: KK737147.1 Klebsiella pneumoniae CHS 44 genomic scaffold aedYU-supercont1.8, whole genome shotgun sequence (42013 bp)
Overview 1 RT 1: 38527-41721 bp Neighborhood of RT #1 [38527, 42013] umuC PRK10276 RVT-GII Feature: gene Location: 38527-39798 bp Feature: domain Description: umuC Location: 38530-39793 bp Feature: domain Description: umuC Location: 38530-39793 bp Feature: gene Location: 39798-40223 bp Feature: domain Description: PRK10276 Location: 39801-40209 bp Feature: domain Description: PRK1 0276 Location: 39801 -40209 bp Feature: gene Location: 40626-42013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41031-41721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 031 -41 721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: KK737140.1 Klebsiella pneumoniae CHS 44 genomic scaffold aedYU-supercont1.1, whole genome shotgun sequence (3398463 bp)
Overview 1 RT 1: 750171-756654 bp Neighborhood of RT #1 [750171, 756656] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 750171-751229 bp Feature: domain Description: YccC Location: 750177-751215 bp Feature: domain Description: YccC Location: 750177-7512 15 bp Feature: gene Location: 751328-751801 bp Feature: domain Description: PRK10016 Location: 751331-751790 bp Feature: domain Description: PRK10016 Location: 751331-751790 bp Feature: gene Location: 751883-753370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752288-752978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752 2 88-752 978 bp Feature: gene Location: 753888-755051 bp Feature: domain Description: dacD Location: 753891-755046 bp Feature: domain Description: dacD Location: 753891-755046 bp Feature: gene Location: 755232-756656 bp Feature: domain Description: SbcB Location: 755238-756654 bp Feature: domain Description: SbcB Location: 7552 38-756654 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KK737142.1 Klebsiella pneumoniae CHS 44 genomic scaffold aedYU-supercont1.3, whole genome shotgun sequence (484785 bp)
Overview 1 RT 1: 117-5212 bp Neighborhood of RT #1 [117, 5214] PinE RVT-GII PRK10276 umuC Feature: gene Location: 117-566 bp Feature: domain Description: PinE Location: 126-558 bp Feature: domain Description: PinE Location: 126-558 bp Feature: gene Location: 1961-3448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2366-3056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 66-3 056 bp Feature: gene Location: 3441-3947 bp Feature: domain Description: PRK10276 Location: 3531-3942 bp Feature: domain Description: PRK10276 Location: 3 53 1-3 942 bp Feature: gene Location: 3949-5214 bp Feature: domain Description: umuC Location: 3952-5212 bp Feature: domain Description: umuC Location: 3 952-5212 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KK737141.1 Klebsiella pneumoniae CHS 44 genomic scaffold aedYU-supercont1.2, whole genome shotgun sequence (1563257 bp)
Overview 1 RT 1: 588952-592359 bp 2 RT 2: 1031594-1037199 bp 3 RT 3: 1384339-1389757 bp Neighborhood of RT #1 [588952, 592460] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1031594, 1037225] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1384339, 1389759] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 588952-589683 bp Feature: domain Description: Laminin_G_3 Location: 589273-589627 bp Feature: domain Description: Laminin_G_3 Location: 589273-589627 bp Feature: gene Location: 589680-589889 bp Feature: gene Location: 590339-591826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 590744-591434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59074 4 -5914 34 bp Feature: gene Location: 591904-592143 bp Feature: gene Location: 592143-592460 bp Feature: domain Description: PRK10276 Location: 592149-592263 bp Feature: domain Description: PRK10276 Location: 59214 9-592263 bp Feature: domain Description: PRK10276 Location: 592290-592359 bp Feature: domain Description: PRK10276 Location: 592290-592359 bp Feature: gene Location: 1031594-1032157 bp Feature: domain Description: YbjK Location: 1031600-1032137 bp Feature: domain Description: YbjK Location: 1031600-1032137 bp Feature: gene Location: 1032280-1033332 bp Feature: domain Description: int Location: 1032283-1033282 bp Feature: domain Description: int Location: 1032283-1033282 bp Feature: gene Location: 1033748-1035235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1034153-1034843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1034 153-1034 84 3 bp Feature: gene Location: 1035334-1036278 bp Feature: gene Location: 1036290-1037225 bp Feature: domain Description: Phage_CI_repr Location: 1036374-1036557 bp Feature: domain Description: Phage_CI_repr Location: 1036374 -1036557 bp Feature: domain Description: Phage_CI_repr Location: 1036686-1036878 bp Feature: domain Description: Phage_CI_repr Location: 1036686-1036878 bp Feature: domain Description: Phage_CI_C Location: 1036905-1037199 bp Feature: domain Description: Phage_CI_C Location: 1036905-1037199 bp Feature: gene Location: 1384339-1385478 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1384522-1385422 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1384 522-13854 22 bp Feature: gene Location: 1385649-1385891 bp Feature: domain Description: DinI Location: 1385700-1385880 bp Feature: domain Description: DinI Location: 1385700-1385880 bp Feature: gene Location: 1386506-1387993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1386911-1387601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1386911-1387601 bp Feature: gene Location: 1388072-1388491 bp Feature: domain Description: PRK10276 Location: 1388075-1388486 bp Feature: domain Description: PRK10276 Location: 1388075-13884 86 bp Feature: gene Location: 1388494-1389759 bp Feature: domain Description: umuC Location: 1388497-1389757 bp Feature: domain Description: umuC Location: 13884 97-1389757 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)