myRT

myRT report for GCA_000693875.1_Kleb_pneu_CHS_46_V1

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Seq: KK737168.1 Klebsiella pneumoniae CHS 46 genomic scaffold aeeaQ-supercont1.2, whole genome shotgun sequence (1554167 bp)
Overview 1 RT 1: 587592-590999 bp 2 RT 2: 1030204-1035809 bp 3 RT 3: 1373277-1378695 bp Neighborhood of RT #1 [587592, 591100] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1030204, 1035835] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1373277, 1378697] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 587592-588323 bp Feature: domain Description: Laminin_G_3 Location: 587913-588267 bp Feature: domain Description: Laminin_G_3 Location: 58791 3-588267 bp Feature: gene Location: 588320-588529 bp Feature: gene Location: 588979-590466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 589384-590074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 589384-590074 bp Feature: gene Location: 590544-590783 bp Feature: gene Location: 590783-591100 bp Feature: domain Description: PRK10276 Location: 590789-590903 bp Feature: domain Description: PRK1 0276 Location: 590789-590903 bp Feature: domain Description: PRK10276 Location: 590930-590999 bp Feature: domain Description: PRK1 0276 Location: 590930-590999 bp Feature: gene Location: 1030204-1030767 bp Feature: domain Description: YbjK Location: 1030210-1030747 bp Feature: domain Description: YbjK Location: 1 03021 0-1 030747 bp Feature: gene Location: 1030890-1031942 bp Feature: domain Description: int Location: 1030893-1031892 bp Feature: domain Description: int Location: 1 030893-1 031 892 bp Feature: gene Location: 1032358-1033845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1032763-1033453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 032763-1 033453 bp Feature: gene Location: 1033944-1034888 bp Feature: gene Location: 1034900-1035835 bp Feature: domain Description: Phage_CI_repr Location: 1034984-1035167 bp Feature: domain Description: Phage_CI_repr Location: 1 034984-1 0351 67 bp Feature: domain Description: Phage_CI_repr Location: 1035296-1035488 bp Feature: domain Description: Phage_CI_repr Location: 1 035296-1 035488 bp Feature: domain Description: Phage_CI_C Location: 1035515-1035809 bp Feature: domain Description: Phage_CI_C Location: 1 03551 5-1 035809 bp Feature: gene Location: 1373277-1374416 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1373460-1374360 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 373460-1 374360 bp Feature: gene Location: 1374587-1374829 bp Feature: domain Description: DinI Location: 1374638-1374818 bp Feature: domain Description: DinI Location: 1 374638-1 37481 8 bp Feature: gene Location: 1375444-1376931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1375849-1376539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 375849-1 376539 bp Feature: gene Location: 1377010-1377429 bp Feature: domain Description: PRK10276 Location: 1377013-1377424 bp Feature: domain Description: PRK1 0276 Location: 1 37701 3-1 377424 bp Feature: gene Location: 1377432-1378697 bp Feature: domain Description: umuC Location: 1377435-1378695 bp Feature: domain Description: umuC Location: 1 377435-1 378695 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)

Seq: KK737167.1 Klebsiella pneumoniae CHS 46 genomic scaffold aeeaQ-supercont1.1, whole genome shotgun sequence (3927246 bp)
Overview 1 RT 1: 4729-10070 bp 2 RT 2: 1267237-1273720 bp Neighborhood of RT #1 [4729, 10072] PinE RVT-GII PRK10276 umuC Neighborhood of RT #2 [1267237, 1273722] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 4729-4909 bp Feature: gene Location: 4975-5424 bp Feature: domain Description: PinE Location: 4984-5416 bp Feature: domain Description: PinE Location: 4984-5416 bp Feature: gene Location: 6819-8306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7224-7914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 2 4-7914 bp Feature: gene Location: 8299-8805 bp Feature: domain Description: PRK10276 Location: 8389-8800 bp Feature: domain Description: PRK102 76 Location: 8389-8800 bp Feature: gene Location: 8807-10072 bp Feature: domain Description: umuC Location: 8810-10070 bp Feature: domain Description: umuC Location: 8810-10070 bp Feature: gene Location: 1267237-1268295 bp Feature: domain Description: YccC Location: 1267243-1268281 bp Feature: domain Description: YccC Location: 12 672 43-12 682 81 bp Feature: gene Location: 1268394-1268867 bp Feature: domain Description: PRK10016 Location: 1268397-1268856 bp Feature: domain Description: PRK10016 Location: 12 68397-12 68856 bp Feature: gene Location: 1268949-1270436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1269354-1270044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 69354-12 70044 bp Feature: gene Location: 1270954-1272117 bp Feature: domain Description: dacD Location: 1270957-1272112 bp Feature: domain Description: dacD Location: 12 70957-12 72 112 bp Feature: gene Location: 1272298-1273722 bp Feature: domain Description: SbcB Location: 1272304-1273720 bp Feature: domain Description: SbcB Location: 12 72 304-12 7372 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KK737170.1 Klebsiella pneumoniae CHS 46 genomic scaffold aeeaQ-supercont1.4, whole genome shotgun sequence (86748 bp)
Overview 1 RT 1: 78842-84395 bp Neighborhood of RT #1 [78842, 84400] DDE_Tnp_IS1 BetT RVT-GII PRK10276 umuC Feature: gene Location: 78842-79135 bp Feature: domain Description: DDE_Tnp_IS1 Location: 78845-79133 bp Feature: domain Description: DDE_Tnp_IS1 Location: 78845-7913 3 bp Feature: gene Location: 79287-80765 bp Feature: domain Description: BetT Location: 79317-80757 bp Feature: domain Description: BetT Location: 793 17-80757 bp Feature: gene Location: 80814-82301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81219-81909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81219-81909 bp Feature: gene Location: 82704-83129 bp Feature: domain Description: PRK10276 Location: 82707-83115 bp Feature: domain Description: PRK10276 Location: 82707-83 115 bp Feature: gene Location: 83129-84400 bp Feature: domain Description: umuC Location: 83132-84395 bp Feature: domain Description: umuC Location: 83 13 2-843 95 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), BetT (COG1292), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)