myRT

myRT report for GCA_000693915.1_Kleb_pneu_CHS_49_V1

Download annotations/find similar RTs

Seq: KK737183.1 Klebsiella pneumoniae CHS 49 genomic scaffold aedZA-supercont1.1, whole genome shotgun sequence (5305016 bp)
Overview 1 RT 1: 584797-588204 bp 2 RT 2: 1026032-1031637 bp 3 RT 3: 1368534-1373952 bp 4 RT 4: 2730804-2737287 bp Neighborhood of RT #1 [584797, 588305] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026032, 1031663] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1368534, 1373954] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2730804, 2737289] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 584797-585528 bp Feature: domain Description: Laminin_G_3 Location: 585118-585472 bp Feature: domain Description: Laminin_G_3 Location: 5851 1 8-585472 bp Feature: gene Location: 585525-585734 bp Feature: gene Location: 586187-587671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586589-587279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586589-587279 bp Feature: gene Location: 587749-587988 bp Feature: gene Location: 587988-588305 bp Feature: domain Description: PRK10276 Location: 587994-588108 bp Feature: domain Description: PRK1 0276 Location: 587994-5881 08 bp Feature: domain Description: PRK10276 Location: 588135-588204 bp Feature: domain Description: PRK1 0276 Location: 5881 35-588204 bp Feature: gene Location: 1026032-1026595 bp Feature: domain Description: YbjK Location: 1026038-1026575 bp Feature: domain Description: YbjK Location: 1 026038-1 026575 bp Feature: gene Location: 1026718-1027770 bp Feature: domain Description: int Location: 1026721-1027720 bp Feature: domain Description: int Location: 1 026721 -1 027720 bp Feature: gene Location: 1028189-1029673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028591-1029281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 028591 -1 029281 bp Feature: gene Location: 1029772-1030716 bp Feature: gene Location: 1030728-1031663 bp Feature: domain Description: Phage_CI_repr Location: 1030812-1030995 bp Feature: domain Description: Phage_CI_repr Location: 1 03081 2-1 030995 bp Feature: domain Description: Phage_CI_repr Location: 1031124-1031316 bp Feature: domain Description: Phage_CI_repr Location: 1 031 1 24-1 031 31 6 bp Feature: domain Description: Phage_CI_C Location: 1031343-1031637 bp Feature: domain Description: Phage_CI_C Location: 1 031 343-1 031 637 bp Feature: gene Location: 1368534-1369673 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1368717-1369617 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 36871 7-1 36961 7 bp Feature: gene Location: 1369844-1370086 bp Feature: domain Description: DinI Location: 1369895-1370075 bp Feature: domain Description: DinI Location: 1 369895-1 370075 bp Feature: gene Location: 1370704-1372188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1371106-1371796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 371 1 06-1 371 796 bp Feature: gene Location: 1372267-1372686 bp Feature: domain Description: PRK10276 Location: 1372270-1372681 bp Feature: domain Description: PRK1 0276 Location: 1 372270-1 372681 bp Feature: gene Location: 1372689-1373954 bp Feature: domain Description: umuC Location: 1372692-1373952 bp Feature: domain Description: umuC Location: 1 372692-1 373952 bp Feature: gene Location: 2730804-2731862 bp Feature: domain Description: YccC Location: 2730810-2731848 bp Feature: domain Description: YccC Location: 273081 0-2731 848 bp Feature: gene Location: 2731961-2732434 bp Feature: domain Description: PRK10016 Location: 2731964-2732423 bp Feature: domain Description: PRK1 001 6 Location: 2731 964-2732423 bp Feature: gene Location: 2732516-2734000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2732918-2733608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 273291 8-2733608 bp Feature: gene Location: 2734521-2735684 bp Feature: domain Description: dacD Location: 2734524-2735679 bp Feature: domain Description: dacD Location: 2734524-2735679 bp Feature: gene Location: 2735865-2737289 bp Feature: domain Description: SbcB Location: 2735871-2737287 bp Feature: domain Description: SbcB Location: 2735871 -2737287 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KK737187.1 Klebsiella pneumoniae CHS 49 genomic scaffold aedZA-supercont1.5, whole genome shotgun sequence (41590 bp)
Overview 1 RT 1: 32149-36585 bp Neighborhood of RT #1 [32149, 36593] DDE_Tnp_IS1 InsA RVT-GII PRK10276 umuC Feature: gene Location: 32149-32526 bp Feature: domain Description: DDE_Tnp_IS1 Location: 32152-32524 bp Feature: domain Description: DDE_Tnp_IS1 Location: 32 152 -32 52 4 bp Feature: gene Location: 32571-32846 bp Feature: domain Description: InsA Location: 32577-32838 bp Feature: domain Description: InsA Location: 32 577-32 838 bp Feature: gene Location: 32998-34482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33400-34090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33400-34090 bp Feature: gene Location: 34891-35322 bp Feature: domain Description: PRK10276 Location: 34942-35305 bp Feature: domain Description: PRK102 76 Location: 34942 -35305 bp Feature: gene Location: 35322-36593 bp Feature: domain Description: umuC Location: 35325-36585 bp Feature: domain Description: umuC Location: 3532 5-36585 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), InsA (COG3677), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KK737184.1 Klebsiella pneumoniae CHS 49 genomic scaffold aedZA-supercont1.2, whole genome shotgun sequence (237028 bp)
Overview 1 RT 1: 16014-21005 bp Neighborhood of RT #1 [16014, 21010] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 16014-16439 bp Feature: domain Description: Antirestrict Location: 16149-16437 bp Feature: domain Description: Antirestrict Location: 16149-1643 7 bp Feature: gene Location: 16960-17190 bp Feature: gene Location: 17424-18908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17826-18516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17826-18516 bp Feature: gene Location: 19314-19739 bp Feature: domain Description: PRK10276 Location: 19317-19725 bp Feature: domain Description: PRK10276 Location: 193 17-19725 bp Feature: gene Location: 19739-21010 bp Feature: domain Description: umuC Location: 19742-21005 bp Feature: domain Description: umuC Location: 19742-21005 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)