myRT

myRT report for GCA_000693935.1_Kleb_pneu_CHS_50_V1

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Seq: KK737193.1 Klebsiella pneumoniae CHS 50 genomic scaffold aedZK-supercont1.2, whole genome shotgun sequence (962484 bp)
Overview 1 RT 1: 38179-41586 bp 2 RT 2: 480821-486426 bp 3 RT 3: 824099-829517 bp Neighborhood of RT #1 [38179, 41687] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [480821, 486452] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [824099, 829519] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 38179-38910 bp Feature: domain Description: Laminin_G_3 Location: 38500-38854 bp Feature: domain Description: Laminin_G_3 Location: 38500-38854 bp Feature: gene Location: 38907-39116 bp Feature: gene Location: 39569-41053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39971-40661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39971 -40661 bp Feature: gene Location: 41131-41370 bp Feature: gene Location: 41370-41687 bp Feature: domain Description: PRK10276 Location: 41376-41490 bp Feature: domain Description: PRK1 0276 Location: 41 376-41 490 bp Feature: domain Description: PRK10276 Location: 41517-41586 bp Feature: domain Description: PRK1 0276 Location: 41 51 7-41 586 bp Feature: gene Location: 480821-481384 bp Feature: domain Description: YbjK Location: 480827-481364 bp Feature: domain Description: YbjK Location: 480827-481 364 bp Feature: gene Location: 481507-482559 bp Feature: domain Description: int Location: 481510-482509 bp Feature: domain Description: int Location: 481 51 0-482509 bp Feature: gene Location: 482978-484462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 483380-484070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 483380-484070 bp Feature: gene Location: 484561-485505 bp Feature: gene Location: 485517-486452 bp Feature: domain Description: Phage_CI_repr Location: 485601-485784 bp Feature: domain Description: Phage_CI_repr Location: 485601 -485784 bp Feature: domain Description: Phage_CI_repr Location: 485913-486105 bp Feature: domain Description: Phage_CI_repr Location: 48591 3-4861 05 bp Feature: domain Description: Phage_CI_C Location: 486132-486426 bp Feature: domain Description: Phage_CI_C Location: 4861 32-486426 bp Feature: gene Location: 824099-825238 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 824282-825182 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 824282-8251 82 bp Feature: gene Location: 825409-825651 bp Feature: domain Description: DinI Location: 825460-825640 bp Feature: domain Description: DinI Location: 825460-825640 bp Feature: gene Location: 826269-827753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 826671-827361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 826671 -827361 bp Feature: gene Location: 827832-828251 bp Feature: domain Description: PRK10276 Location: 827835-828246 bp Feature: domain Description: PRK1 0276 Location: 827835-828246 bp Feature: gene Location: 828254-829519 bp Feature: domain Description: umuC Location: 828257-829517 bp Feature: domain Description: umuC Location: 828257-82951 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)

Seq: KK737192.1 Klebsiella pneumoniae CHS 50 genomic scaffold aedZK-supercont1.1, whole genome shotgun sequence (4068030 bp)
Overview 1 RT 1: 1417556-1424039 bp 2 RT 2: 1868718-1872199 bp Neighborhood of RT #1 [1417556, 1424041] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #2 [1868718, 1872199] Terminase_2 RVT-GII Feature: gene Location: 1417556-1418614 bp Feature: domain Description: YccC Location: 1417562-1418600 bp Feature: domain Description: YccC Location: 1417562 -1418600 bp Feature: gene Location: 1418713-1419186 bp Feature: domain Description: PRK10016 Location: 1418716-1419175 bp Feature: domain Description: PRK10016 Location: 1418716-1419175 bp Feature: gene Location: 1419268-1420752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1419670-1420360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1419670-142 0360 bp Feature: gene Location: 1421273-1422436 bp Feature: domain Description: dacD Location: 1421276-1422431 bp Feature: domain Description: dacD Location: 142 12 76-142 2 431 bp Feature: gene Location: 1422617-1424041 bp Feature: domain Description: SbcB Location: 1422623-1424039 bp Feature: domain Description: SbcB Location: 142 2 62 3-142 4039 bp Feature: gene Location: 1868718-1869302 bp Feature: domain Description: Terminase_2 Location: 1868763-1869228 bp Feature: domain Description: Terminase_2 Location: 1868763-18692 2 8 bp Feature: gene Location: 1869380-1869637 bp Feature: gene Location: 1870041-1871525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1870443-1871133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1870443-1871133 bp Feature: gene Location: 1871622-1871960 bp Feature: gene Location: 1871960-1872199 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925), Terminase_2 (pfam03592)