myRT

myRT report for GCA_000693975.1_Kleb_pneu_CHS_52_V1

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Seq: KK737222.1 Klebsiella pneumoniae CHS 52 genomic scaffold aedZR-supercont1.7, whole genome shotgun sequence (31949 bp)
Overview 1 RT 1: 28463-31657 bp Neighborhood of RT #1 [28463, 31949] umuC PRK10276 RVT-GII Feature: gene Location: 28463-29734 bp Feature: domain Description: umuC Location: 28466-29729 bp Feature: domain Description: umuC Location: 28466-29729 bp Feature: gene Location: 29734-30159 bp Feature: domain Description: PRK10276 Location: 29737-30145 bp Feature: domain Description: PRK1 0276 Location: 29737-301 45 bp Feature: gene Location: 30562-31949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30967-31657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30967-31 657 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: KK737217.1 Klebsiella pneumoniae CHS 52 genomic scaffold aedZR-supercont1.2, whole genome shotgun sequence (1546750 bp)
Overview 1 RT 1: 583256-586663 bp 2 RT 2: 1025898-1031503 bp 3 RT 3: 1369597-1375015 bp Neighborhood of RT #1 [583256, 586764] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1025898, 1031529] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369597, 1375017] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 583256-583987 bp Feature: domain Description: Laminin_G_3 Location: 583577-583931 bp Feature: domain Description: Laminin_G_3 Location: 583577-583931 bp Feature: gene Location: 583984-584193 bp Feature: gene Location: 584643-586130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585048-585738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585048-585738 bp Feature: gene Location: 586208-586447 bp Feature: gene Location: 586447-586764 bp Feature: domain Description: PRK10276 Location: 586453-586567 bp Feature: domain Description: PRK102 76 Location: 586453-586567 bp Feature: domain Description: PRK10276 Location: 586594-586663 bp Feature: domain Description: PRK102 76 Location: 586594-586663 bp Feature: gene Location: 1025898-1026461 bp Feature: domain Description: YbjK Location: 1025904-1026441 bp Feature: domain Description: YbjK Location: 102 5904-102 6441 bp Feature: gene Location: 1026584-1027636 bp Feature: domain Description: int Location: 1026587-1027586 bp Feature: domain Description: int Location: 102 6587-102 7586 bp Feature: gene Location: 1028052-1029539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028457-1029147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 8457-102 9147 bp Feature: gene Location: 1029638-1030582 bp Feature: gene Location: 1030594-1031529 bp Feature: domain Description: Phage_CI_repr Location: 1030678-1030861 bp Feature: domain Description: Phage_CI_repr Location: 1030678-1030861 bp Feature: domain Description: Phage_CI_repr Location: 1030990-1031182 bp Feature: domain Description: Phage_CI_repr Location: 1030990-1031182 bp Feature: domain Description: Phage_CI_C Location: 1031209-1031503 bp Feature: domain Description: Phage_CI_C Location: 10312 09-1031503 bp Feature: gene Location: 1369597-1370736 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369780-1370680 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369780-1370680 bp Feature: gene Location: 1370907-1371149 bp Feature: domain Description: DinI Location: 1370958-1371138 bp Feature: domain Description: DinI Location: 1370958-1371138 bp Feature: gene Location: 1371764-1373251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372169-1372859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372 169-1372 859 bp Feature: gene Location: 1373330-1373749 bp Feature: domain Description: PRK10276 Location: 1373333-1373744 bp Feature: domain Description: PRK102 76 Location: 1373333-1373744 bp Feature: gene Location: 1373752-1375017 bp Feature: domain Description: umuC Location: 1373755-1375015 bp Feature: domain Description: umuC Location: 1373755-1375015 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)

Seq: KK737216.1 Klebsiella pneumoniae CHS 52 genomic scaffold aedZR-supercont1.1, whole genome shotgun sequence (4027147 bp)
Overview 1 RT 1: 18818-23913 bp 2 RT 2: 1355272-1361755 bp Neighborhood of RT #1 [18818, 23915] PinE RVT-GII PRK10276 umuC Neighborhood of RT #2 [1355272, 1361757] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 18818-19267 bp Feature: domain Description: PinE Location: 18827-19259 bp Feature: domain Description: PinE Location: 18827-19259 bp Feature: gene Location: 20662-22149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21067-21757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21067-21757 bp Feature: gene Location: 22142-22648 bp Feature: domain Description: PRK10276 Location: 22232-22643 bp Feature: domain Description: PRK10276 Location: 2223 2-22643 bp Feature: gene Location: 22650-23915 bp Feature: domain Description: umuC Location: 22653-23913 bp Feature: domain Description: umuC Location: 22653 -23 913 bp Feature: gene Location: 1355272-1356330 bp Feature: domain Description: YccC Location: 1355278-1356316 bp Feature: domain Description: YccC Location: 13 55278-13 563 16 bp Feature: gene Location: 1356429-1356902 bp Feature: domain Description: PRK10016 Location: 1356432-1356891 bp Feature: domain Description: PRK10016 Location: 13 5643 2-13 56891 bp Feature: gene Location: 1356984-1358471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1357389-1358079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 573 89-13 58079 bp Feature: gene Location: 1358989-1360152 bp Feature: domain Description: dacD Location: 1358992-1360147 bp Feature: domain Description: dacD Location: 13 58992-13 60147 bp Feature: gene Location: 1360333-1361757 bp Feature: domain Description: SbcB Location: 1360339-1361755 bp Feature: domain Description: SbcB Location: 13 603 3 9-13 61755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)