myRT

myRT report for GCA_000693995.1_Kleb_pneu_CHS_53_V1

Download annotations/find similar RTs

Seq: KK737228.1 (780888 bp)
Overview 1 RT 1: 329324-332731 bp 2 RT 2: 773126-778731 bp Neighborhood of RT #1 [329324, 332832] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [773126, 778757] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Feature: gene Location: 329324-330055 bp Feature: domain Description: Laminin_G_3 Location: 329645-329999 bp Feature: domain Description: Laminin_G_3 Location: 329645-329999 bp Feature: gene Location: 330052-330261 bp Feature: gene Location: 330711-332198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331116-331806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331 1 1 6-331 806 bp Feature: gene Location: 332276-332515 bp Feature: gene Location: 332515-332832 bp Feature: domain Description: PRK10276 Location: 332521-332635 bp Feature: domain Description: PRK1 0276 Location: 332521 -332635 bp Feature: domain Description: PRK10276 Location: 332662-332731 bp Feature: domain Description: PRK1 0276 Location: 332662-332731 bp Feature: gene Location: 773126-773689 bp Feature: domain Description: YbjK Location: 773132-773669 bp Feature: domain Description: YbjK Location: 7731 32-773669 bp Feature: gene Location: 773812-774864 bp Feature: domain Description: int Location: 773815-774814 bp Feature: domain Description: int Location: 77381 5-77481 4 bp Feature: gene Location: 775280-776767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 775685-776375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 775685-776375 bp Feature: gene Location: 776866-777810 bp Feature: gene Location: 777822-778757 bp Feature: domain Description: Phage_CI_repr Location: 777906-778089 bp Feature: domain Description: Phage_CI_repr Location: 777906-778089 bp Feature: domain Description: Phage_CI_repr Location: 778218-778410 bp Feature: domain Description: Phage_CI_repr Location: 77821 8-77841 0 bp Feature: domain Description: Phage_CI_C Location: 778437-778731 bp Feature: domain Description: Phage_CI_C Location: 778437-778731 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452)

Seq: KK737241.1 (66011 bp)
Overview 1 RT 1: 58307-63600 bp Neighborhood of RT #1 [58307, 63605] YccC PRK10016 RVT-GII PRK10276 umuC Feature: gene Location: 58307-59365 bp Feature: domain Description: YccC Location: 58313-59351 bp Feature: domain Description: YccC Location: 58313-59351 bp Feature: gene Location: 59464-59937 bp Feature: domain Description: PRK10016 Location: 59467-59926 bp Feature: domain Description: PRK10016 Location: 59467-5992 6 bp Feature: gene Location: 60019-61506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60424-61114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6042 4-61114 bp Feature: gene Location: 61909-62334 bp Feature: domain Description: PRK10276 Location: 61912-62320 bp Feature: domain Description: PRK102 76 Location: 61912 -62 32 0 bp Feature: gene Location: 62334-63605 bp Feature: domain Description: umuC Location: 62337-63600 bp Feature: domain Description: umuC Location: 62 337-63600 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KK737239.1 (81885 bp)
Overview 1 RT 1: 575-6440 bp Neighborhood of RT #1 [575, 6442] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 575-1279 bp Feature: domain Description: Rve Location: 578-1223 bp Feature: domain Description: Rve Location: 578-1223 bp Feature: gene Location: 1345-1794 bp Feature: domain Description: PinE Location: 1354-1786 bp Feature: domain Description: PinE Location: 13 54-1786 bp Feature: gene Location: 3189-4676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3594-4284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 594-4284 bp Feature: gene Location: 4669-5175 bp Feature: domain Description: PRK10276 Location: 4759-5170 bp Feature: domain Description: PRK10276 Location: 4759-5170 bp Feature: gene Location: 5177-6442 bp Feature: domain Description: umuC Location: 5180-6440 bp Feature: domain Description: umuC Location: 5180-6440 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Rve (COG3316)

Seq: KK737231.1 (370720 bp)
Overview 1 RT 1: 334947-340365 bp Neighborhood of RT #1 [334947, 340367] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 334947-336086 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 335130-336030 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 335130-336030 bp Feature: gene Location: 336257-336499 bp Feature: domain Description: DinI Location: 336308-336488 bp Feature: domain Description: DinI Location: 336308-3364 88 bp Feature: gene Location: 337114-338601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 337519-338209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 337519-338209 bp Feature: gene Location: 338680-339099 bp Feature: domain Description: PRK10276 Location: 338683-339094 bp Feature: domain Description: PRK10276 Location: 338683-339094 bp Feature: gene Location: 339102-340367 bp Feature: domain Description: umuC Location: 339105-340365 bp Feature: domain Description: umuC Location: 339105-34 0365 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KK737229.1 (550423 bp)
Overview 1 RT 1: 1-4550 bp Neighborhood of RT #1 [1, 4552] RVT-GII dacD SbcB Feature: gene Location: 1-1266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 406-1096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 406-1096 bp Feature: gene Location: 1784-2947 bp Feature: domain Description: dacD Location: 1787-2942 bp Feature: domain Description: dacD Location: 1787-2942 bp Feature: gene Location: 3128-4552 bp Feature: domain Description: SbcB Location: 3134-4550 bp Feature: domain Description: SbcB Location: 3134-45 5 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, dacD (PRK11397), SbcB (COG2925)