myRT

myRT report for GCA_000694015.1_Kleb_pneu_CHS_54_V1

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Seq: KK737268.1 (5577199 bp)
Overview 1 RT 1: 584714-588121 bp 2 RT 2: 1027206-1032811 bp 3 RT 3: 1371341-1376759 bp 4 RT 4: 1554463-1560328 bp 5 RT 5: 2892529-2899012 bp Neighborhood of RT #1 [584714, 588222] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1027206, 1032837] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1371341, 1376761] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1554463, 1560330] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2892529, 2899014] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 584714-585445 bp Feature: domain Description: Laminin_G_3 Location: 585035-585389 bp Feature: domain Description: Laminin_G_3 Location: 585035-585389 bp Feature: gene Location: 585442-585651 bp Feature: gene Location: 586101-587588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586506-587196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586506-5871 96 bp Feature: gene Location: 587666-587905 bp Feature: gene Location: 587905-588222 bp Feature: domain Description: PRK10276 Location: 587911-588025 bp Feature: domain Description: PRK1 0276 Location: 58791 1 -588025 bp Feature: domain Description: PRK10276 Location: 588052-588121 bp Feature: domain Description: PRK1 0276 Location: 588052-5881 21 bp Feature: gene Location: 1027206-1027769 bp Feature: domain Description: YbjK Location: 1027212-1027749 bp Feature: domain Description: YbjK Location: 1 02721 2-1 027749 bp Feature: gene Location: 1027892-1028944 bp Feature: domain Description: int Location: 1027895-1028894 bp Feature: domain Description: int Location: 1 027895-1 028894 bp Feature: gene Location: 1029360-1030847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029765-1030455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 029765-1 030455 bp Feature: gene Location: 1030946-1031890 bp Feature: gene Location: 1031902-1032837 bp Feature: domain Description: Phage_CI_repr Location: 1031986-1032169 bp Feature: domain Description: Phage_CI_repr Location: 1 031 986-1 0321 69 bp Feature: domain Description: Phage_CI_repr Location: 1032298-1032490 bp Feature: domain Description: Phage_CI_repr Location: 1 032298-1 032490 bp Feature: domain Description: Phage_CI_C Location: 1032517-1032811 bp Feature: domain Description: Phage_CI_C Location: 1 03251 7-1 03281 1 bp Feature: gene Location: 1371341-1372480 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1371524-1372424 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 371 524-1 372424 bp Feature: gene Location: 1372651-1372893 bp Feature: domain Description: DinI Location: 1372702-1372882 bp Feature: domain Description: DinI Location: 1 372702-1 372882 bp Feature: gene Location: 1373508-1374995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1373913-1374603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 37391 3-1 374603 bp Feature: gene Location: 1375074-1375493 bp Feature: domain Description: PRK10276 Location: 1375077-1375488 bp Feature: domain Description: PRK1 0276 Location: 1 375077-1 375488 bp Feature: gene Location: 1375496-1376761 bp Feature: domain Description: umuC Location: 1375499-1376759 bp Feature: domain Description: umuC Location: 1 375499-1 376759 bp Feature: gene Location: 1554463-1555167 bp Feature: domain Description: Rve Location: 1554466-1555111 bp Feature: domain Description: Rve Location: 1 554466-1 5551 1 1 bp Feature: gene Location: 1555233-1555682 bp Feature: domain Description: PinE Location: 1555242-1555674 bp Feature: domain Description: PinE Location: 1 555242-1 555674 bp Feature: gene Location: 1557077-1558564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1557482-1558172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 557482-1 5581 72 bp Feature: gene Location: 1558557-1559063 bp Feature: domain Description: PRK10276 Location: 1558647-1559058 bp Feature: domain Description: PRK1 0276 Location: 1 558647-1 559058 bp Feature: gene Location: 1559065-1560330 bp Feature: domain Description: umuC Location: 1559068-1560328 bp Feature: domain Description: umuC Location: 1 559068-1 560328 bp Feature: gene Location: 2892529-2893587 bp Feature: domain Description: YccC Location: 2892535-2893573 bp Feature: domain Description: YccC Location: 2892535-2893573 bp Feature: gene Location: 2893686-2894159 bp Feature: domain Description: PRK10016 Location: 2893689-2894148 bp Feature: domain Description: PRK1 001 6 Location: 2893689-28941 48 bp Feature: gene Location: 2894241-2895728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2894646-2895336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2894646-2895336 bp Feature: gene Location: 2896246-2897409 bp Feature: domain Description: dacD Location: 2896249-2897404 bp Feature: domain Description: dacD Location: 2896249-2897404 bp Feature: gene Location: 2897590-2899014 bp Feature: domain Description: SbcB Location: 2897596-2899012 bp Feature: domain Description: SbcB Location: 2897596-289901 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)