myRT

myRT report for GCA_000694035.1_Kleb_pneu_CHS_55_V1

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Seq: KK737273.1 Klebsiella pneumoniae CHS 55 genomic scaffold aeeac-supercont1.1, whole genome shotgun sequence (5557345 bp)
Overview 1 RT 1: 584542-587949 bp 2 RT 2: 1003661-1009266 bp 3 RT 3: 1346148-1351566 bp 4 RT 4: 1525522-1531387 bp 5 RT 5: 2879347-2885830 bp Neighborhood of RT #1 [584542, 588050] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1003661, 1009292] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1346148, 1351568] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1525522, 1531389] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2879347, 2885832] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 584542-585273 bp Feature: domain Description: Laminin_G_3 Location: 584863-585217 bp Feature: domain Description: Laminin_G_3 Location: 584863-58521 7 bp Feature: gene Location: 585270-585479 bp Feature: gene Location: 585932-587416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586334-587024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586334-587024 bp Feature: gene Location: 587494-587733 bp Feature: gene Location: 587733-588050 bp Feature: domain Description: PRK10276 Location: 587739-587853 bp Feature: domain Description: PRK1 0276 Location: 587739-587853 bp Feature: domain Description: PRK10276 Location: 587880-587949 bp Feature: domain Description: PRK1 0276 Location: 587880-587949 bp Feature: gene Location: 1003661-1004224 bp Feature: domain Description: YbjK Location: 1003667-1004204 bp Feature: domain Description: YbjK Location: 1 003667-1 004204 bp Feature: gene Location: 1004347-1005399 bp Feature: domain Description: int Location: 1004350-1005349 bp Feature: domain Description: int Location: 1 004350-1 005349 bp Feature: gene Location: 1005818-1007302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1006220-1006910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 006220-1 00691 0 bp Feature: gene Location: 1007401-1008345 bp Feature: gene Location: 1008357-1009292 bp Feature: domain Description: Phage_CI_repr Location: 1008441-1008624 bp Feature: domain Description: Phage_CI_repr Location: 1 008441 -1 008624 bp Feature: domain Description: Phage_CI_repr Location: 1008753-1008945 bp Feature: domain Description: Phage_CI_repr Location: 1 008753-1 008945 bp Feature: domain Description: Phage_CI_C Location: 1008972-1009266 bp Feature: domain Description: Phage_CI_C Location: 1 008972-1 009266 bp Feature: gene Location: 1346148-1347287 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1346331-1347231 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 346331 -1 347231 bp Feature: gene Location: 1347458-1347700 bp Feature: domain Description: DinI Location: 1347509-1347689 bp Feature: domain Description: DinI Location: 1 347509-1 347689 bp Feature: gene Location: 1348318-1349802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1348720-1349410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 348720-1 34941 0 bp Feature: gene Location: 1349881-1350300 bp Feature: domain Description: PRK10276 Location: 1349884-1350295 bp Feature: domain Description: PRK1 0276 Location: 1 349884-1 350295 bp Feature: gene Location: 1350303-1351568 bp Feature: domain Description: umuC Location: 1350306-1351566 bp Feature: domain Description: umuC Location: 1 350306-1 351 566 bp Feature: gene Location: 1525522-1526226 bp Feature: domain Description: Rve Location: 1525525-1526170 bp Feature: domain Description: Rve Location: 1 525525-1 5261 70 bp Feature: gene Location: 1526292-1526741 bp Feature: domain Description: PinE Location: 1526301-1526733 bp Feature: domain Description: PinE Location: 1 526301 -1 526733 bp Feature: gene Location: 1528139-1529623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1528541-1529231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 528541 -1 529231 bp Feature: gene Location: 1529616-1530122 bp Feature: domain Description: PRK10276 Location: 1529706-1530117 bp Feature: domain Description: PRK1 0276 Location: 1 529706-1 5301 1 7 bp Feature: gene Location: 1530124-1531389 bp Feature: domain Description: umuC Location: 1530127-1531387 bp Feature: domain Description: umuC Location: 1 5301 27-1 531 387 bp Feature: gene Location: 2879347-2880405 bp Feature: domain Description: YccC Location: 2879353-2880391 bp Feature: domain Description: YccC Location: 2879353-2880391 bp Feature: gene Location: 2880504-2880977 bp Feature: domain Description: PRK10016 Location: 2880507-2880966 bp Feature: domain Description: PRK1 001 6 Location: 2880507-2880966 bp Feature: gene Location: 2881059-2882543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2881461-2882151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2881 461 -28821 51 bp Feature: gene Location: 2883064-2884227 bp Feature: domain Description: dacD Location: 2883067-2884222 bp Feature: domain Description: dacD Location: 2883067-2884222 bp Feature: gene Location: 2884408-2885832 bp Feature: domain Description: SbcB Location: 2884414-2885830 bp Feature: domain Description: SbcB Location: 288441 4-2885830 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)