myRT

myRT report for GCA_000694055.1_Kleb_pneu_CHS_56_V1

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Seq: KK737277.1 Klebsiella pneumoniae CHS 56 genomic scaffold aedZm-supercont1.1, whole genome shotgun sequence (5080818 bp)
Overview 1 RT 1: 328223-331630 bp 2 RT 2: 770865-776470 bp 3 RT 3: 1117403-1122821 bp 4 RT 4: 1304519-1310384 bp 5 RT 5: 2544483-2550966 bp Neighborhood of RT #1 [328223, 331731] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [770865, 776496] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1117403, 1122823] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1304519, 1310386] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2544483, 2550968] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 328223-328954 bp Feature: domain Description: Laminin_G_3 Location: 328544-328898 bp Feature: domain Description: Laminin_G_3 Location: 328544-328898 bp Feature: gene Location: 328951-329160 bp Feature: gene Location: 329610-331097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 330015-330705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33001 5-330705 bp Feature: gene Location: 331175-331414 bp Feature: gene Location: 331414-331731 bp Feature: domain Description: PRK10276 Location: 331420-331534 bp Feature: domain Description: PRK1 0276 Location: 331 420-331 534 bp Feature: domain Description: PRK10276 Location: 331561-331630 bp Feature: domain Description: PRK1 0276 Location: 331 561 -331 630 bp Feature: gene Location: 770865-771428 bp Feature: domain Description: YbjK Location: 770871-771408 bp Feature: domain Description: YbjK Location: 770871 -771 408 bp Feature: gene Location: 771551-772603 bp Feature: domain Description: int Location: 771554-772553 bp Feature: domain Description: int Location: 771 554-772553 bp Feature: gene Location: 773019-774506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 773424-774114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 773424-7741 1 4 bp Feature: gene Location: 774605-775549 bp Feature: gene Location: 775561-776496 bp Feature: domain Description: Phage_CI_repr Location: 775645-775828 bp Feature: domain Description: Phage_CI_repr Location: 775645-775828 bp Feature: domain Description: Phage_CI_repr Location: 775957-776149 bp Feature: domain Description: Phage_CI_repr Location: 775957-7761 49 bp Feature: domain Description: Phage_CI_C Location: 776176-776470 bp Feature: domain Description: Phage_CI_C Location: 7761 76-776470 bp Feature: gene Location: 1117403-1118542 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1117586-1118486 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 1 1 7586-1 1 1 8486 bp Feature: gene Location: 1118713-1118955 bp Feature: domain Description: DinI Location: 1118764-1118944 bp Feature: domain Description: DinI Location: 1 1 1 8764-1 1 1 8944 bp Feature: gene Location: 1119570-1121057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1119975-1120665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 9975-1 1 20665 bp Feature: gene Location: 1121136-1121555 bp Feature: domain Description: PRK10276 Location: 1121139-1121550 bp Feature: domain Description: PRK1 0276 Location: 1 1 21 1 39-1 1 21 550 bp Feature: gene Location: 1121558-1122823 bp Feature: domain Description: umuC Location: 1121561-1122821 bp Feature: domain Description: umuC Location: 1 1 21 561 -1 1 22821 bp Feature: gene Location: 1304519-1305223 bp Feature: domain Description: Rve Location: 1304522-1305167 bp Feature: domain Description: Rve Location: 1 304522-1 3051 67 bp Feature: gene Location: 1305289-1305738 bp Feature: domain Description: PinE Location: 1305298-1305730 bp Feature: domain Description: PinE Location: 1 305298-1 305730 bp Feature: gene Location: 1307133-1308620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1307538-1308228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 307538-1 308228 bp Feature: gene Location: 1308613-1309119 bp Feature: domain Description: PRK10276 Location: 1308703-1309114 bp Feature: domain Description: PRK1 0276 Location: 1 308703-1 3091 1 4 bp Feature: gene Location: 1309121-1310386 bp Feature: domain Description: umuC Location: 1309124-1310384 bp Feature: domain Description: umuC Location: 1 3091 24-1 31 0384 bp Feature: gene Location: 2544483-2545541 bp Feature: domain Description: YccC Location: 2544489-2545527 bp Feature: domain Description: YccC Location: 2544489-2545527 bp Feature: gene Location: 2545640-2546113 bp Feature: domain Description: PRK10016 Location: 2545643-2546102 bp Feature: domain Description: PRK1 001 6 Location: 2545643-25461 02 bp Feature: gene Location: 2546195-2547682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2546600-2547290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2546600-2547290 bp Feature: gene Location: 2548200-2549363 bp Feature: domain Description: dacD Location: 2548203-2549358 bp Feature: domain Description: dacD Location: 2548203-2549358 bp Feature: gene Location: 2549544-2550968 bp Feature: domain Description: SbcB Location: 2549550-2550966 bp Feature: domain Description: SbcB Location: 2549550-2550966 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KK737280.1 Klebsiella pneumoniae CHS 56 genomic scaffold aedZm-supercont1.4, whole genome shotgun sequence (85593 bp)
Overview 1 RT 1: 55581-61056 bp Neighborhood of RT #1 [55581, 61061] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 umuC Feature: gene Location: 55581-56252 bp Feature: domain Description: Plasmid_stab_B Location: 55596-55803 bp Feature: domain Description: Plasmid_stab_B Location: 55596-55803 bp Feature: domain Description: Plasmid_stab_B Location: 55908-56115 bp Feature: domain Description: Plasmid_stab_B Location: 55908-56115 bp Feature: gene Location: 56255-57226 bp Feature: domain Description: StbA Location: 56258-57203 bp Feature: domain Description: StbA Location: 562 58-572 03 bp Feature: gene Location: 57475-58962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57880-58570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57880-58570 bp Feature: gene Location: 59365-59790 bp Feature: domain Description: PRK10276 Location: 59368-59776 bp Feature: domain Description: PRK102 76 Location: 59368-59776 bp Feature: gene Location: 59790-61061 bp Feature: domain Description: umuC Location: 59793-61056 bp Feature: domain Description: umuC Location: 59793-61056 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)