myRT

myRT report for GCA_000694075.1_Kleb_pneu_CHS_57_V1

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Seq: KK737302.1 Klebsiella pneumoniae CHS 57 genomic scaffold aeeai-supercont1.14, whole genome shotgun sequence (5867 bp)
Overview 1 RT 1: 2407-5601 bp Neighborhood of RT #1 [2407, 5867] umuC PRK10276 RVT-GII Feature: gene Location: 2407-3678 bp Feature: domain Description: umuC Location: 2410-3673 bp Feature: domain Description: umuC Location: 241 0-3673 bp Feature: gene Location: 3678-4103 bp Feature: domain Description: PRK10276 Location: 3681-4089 bp Feature: domain Description: PRK1 0276 Location: 3681 -4089 bp Feature: gene Location: 4506-5867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4911-5601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 491 1 -5601 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: KK737289.1 Klebsiella pneumoniae CHS 57 genomic scaffold aeeai-supercont1.1, whole genome shotgun sequence (1935500 bp)
Overview 1 RT 1: 3996-9861 bp 2 RT 2: 1381616-1388099 bp Neighborhood of RT #1 [3996, 9863] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #2 [1381616, 1388101] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 3996-4700 bp Feature: domain Description: Rve Location: 3999-4644 bp Feature: domain Description: Rve Location: 3999-4644 bp Feature: gene Location: 4766-5215 bp Feature: domain Description: PinE Location: 4775-5207 bp Feature: domain Description: PinE Location: 4775-52 07 bp Feature: gene Location: 6610-8097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7015-7705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7015-7705 bp Feature: gene Location: 8090-8596 bp Feature: domain Description: PRK10276 Location: 8180-8591 bp Feature: domain Description: PRK102 76 Location: 8180-8591 bp Feature: gene Location: 8598-9863 bp Feature: domain Description: umuC Location: 8601-9861 bp Feature: domain Description: umuC Location: 8601-9861 bp Feature: gene Location: 1381616-1382674 bp Feature: domain Description: YccC Location: 1381622-1382660 bp Feature: domain Description: YccC Location: 138162 2 -1382 660 bp Feature: gene Location: 1382773-1383246 bp Feature: domain Description: PRK10016 Location: 1382776-1383235 bp Feature: domain Description: PRK10016 Location: 1382 776-13832 35 bp Feature: gene Location: 1383328-1384815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1383733-1384423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1383733-138442 3 bp Feature: gene Location: 1385333-1386496 bp Feature: domain Description: dacD Location: 1385336-1386491 bp Feature: domain Description: dacD Location: 1385336-1386491 bp Feature: gene Location: 1386677-1388101 bp Feature: domain Description: SbcB Location: 1386683-1388099 bp Feature: domain Description: SbcB Location: 1386683-1388099 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KK737290.1 Klebsiella pneumoniae CHS 57 genomic scaffold aeeai-supercont1.2, whole genome shotgun sequence (1553640 bp)
Overview 1 RT 1: 586541-589948 bp 2 RT 2: 1029183-1034788 bp 3 RT 3: 1374881-1380299 bp Neighborhood of RT #1 [586541, 590049] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1029183, 1034814] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1374881, 1380301] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 586541-587272 bp Feature: domain Description: Laminin_G_3 Location: 586862-587216 bp Feature: domain Description: Laminin_G_3 Location: 586862-587216 bp Feature: gene Location: 587269-587478 bp Feature: gene Location: 587928-589415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 588333-589023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5883 3 3 -589023 bp Feature: gene Location: 589493-589732 bp Feature: gene Location: 589732-590049 bp Feature: domain Description: PRK10276 Location: 589738-589852 bp Feature: domain Description: PRK10276 Location: 58973 8-589852 bp Feature: domain Description: PRK10276 Location: 589879-589948 bp Feature: domain Description: PRK10276 Location: 589879-589948 bp Feature: gene Location: 1029183-1029746 bp Feature: domain Description: YbjK Location: 1029189-1029726 bp Feature: domain Description: YbjK Location: 1029189-1029726 bp Feature: gene Location: 1029869-1030921 bp Feature: domain Description: int Location: 1029872-1030871 bp Feature: domain Description: int Location: 1029872-103 0871 bp Feature: gene Location: 1031337-1032824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1031742-1032432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 1742-103 243 2 bp Feature: gene Location: 1032923-1033867 bp Feature: gene Location: 1033879-1034814 bp Feature: domain Description: Phage_CI_repr Location: 1033963-1034146 bp Feature: domain Description: Phage_CI_repr Location: 103 3 963 -103 4146 bp Feature: domain Description: Phage_CI_repr Location: 1034275-1034467 bp Feature: domain Description: Phage_CI_repr Location: 103 4275-103 4467 bp Feature: domain Description: Phage_CI_C Location: 1034494-1034788 bp Feature: domain Description: Phage_CI_C Location: 103 4494-103 4788 bp Feature: gene Location: 1374881-1376020 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1375064-1375964 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 13 75064-13 75964 bp Feature: gene Location: 1376191-1376433 bp Feature: domain Description: DinI Location: 1376242-1376422 bp Feature: domain Description: DinI Location: 13 76242-13 76422 bp Feature: gene Location: 1377048-1378535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1377453-1378143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 77453 -13 78143 bp Feature: gene Location: 1378614-1379033 bp Feature: domain Description: PRK10276 Location: 1378617-1379028 bp Feature: domain Description: PRK10276 Location: 13 78617-13 79028 bp Feature: gene Location: 1379036-1380301 bp Feature: domain Description: umuC Location: 1379039-1380299 bp Feature: domain Description: umuC Location: 13 7903 9-13 80299 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)