myRT

myRT report for GCA_000694095.1_Kleb_pneu_CHS_58_V1

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Seq: KK737307.1 Klebsiella pneumoniae CHS 58 genomic scaffold aedZa-supercont1.1, whole genome shotgun sequence (5404579 bp)
Overview 1 RT 1: 583256-586663 bp 2 RT 2: 1025898-1031503 bp 3 RT 3: 1369371-1374789 bp 4 RT 4: 1546987-1552852 bp 5 RT 5: 2754895-2761378 bp Neighborhood of RT #1 [583256, 586764] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1025898, 1031529] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369371, 1374791] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1546987, 1552854] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2754895, 2761380] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 583256-583987 bp Feature: domain Description: Laminin_G_3 Location: 583577-583931 bp Feature: domain Description: Laminin_G_3 Location: 583577-583931 bp Feature: gene Location: 583984-584193 bp Feature: gene Location: 584643-586130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585048-585738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585048-585738 bp Feature: gene Location: 586208-586447 bp Feature: gene Location: 586447-586764 bp Feature: domain Description: PRK10276 Location: 586453-586567 bp Feature: domain Description: PRK1 0276 Location: 586453-586567 bp Feature: domain Description: PRK10276 Location: 586594-586663 bp Feature: domain Description: PRK1 0276 Location: 586594-586663 bp Feature: gene Location: 1025898-1026461 bp Feature: domain Description: YbjK Location: 1025904-1026441 bp Feature: domain Description: YbjK Location: 1 025904-1 026441 bp Feature: gene Location: 1026584-1027636 bp Feature: domain Description: int Location: 1026587-1027586 bp Feature: domain Description: int Location: 1 026587-1 027586 bp Feature: gene Location: 1028052-1029539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028457-1029147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 028457-1 0291 47 bp Feature: gene Location: 1029638-1030582 bp Feature: gene Location: 1030594-1031529 bp Feature: domain Description: Phage_CI_repr Location: 1030678-1030861 bp Feature: domain Description: Phage_CI_repr Location: 1 030678-1 030861 bp Feature: domain Description: Phage_CI_repr Location: 1030990-1031182 bp Feature: domain Description: Phage_CI_repr Location: 1 030990-1 031 1 82 bp Feature: domain Description: Phage_CI_C Location: 1031209-1031503 bp Feature: domain Description: Phage_CI_C Location: 1 031 209-1 031 503 bp Feature: gene Location: 1369371-1370510 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369554-1370454 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 369554-1 370454 bp Feature: gene Location: 1370681-1370923 bp Feature: domain Description: DinI Location: 1370732-1370912 bp Feature: domain Description: DinI Location: 1 370732-1 37091 2 bp Feature: gene Location: 1371538-1373025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1371943-1372633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 371 943-1 372633 bp Feature: gene Location: 1373104-1373523 bp Feature: domain Description: PRK10276 Location: 1373107-1373518 bp Feature: domain Description: PRK1 0276 Location: 1 3731 07-1 37351 8 bp Feature: gene Location: 1373526-1374791 bp Feature: domain Description: umuC Location: 1373529-1374789 bp Feature: domain Description: umuC Location: 1 373529-1 374789 bp Feature: gene Location: 1546987-1547691 bp Feature: domain Description: Rve Location: 1546990-1547635 bp Feature: domain Description: Rve Location: 1 546990-1 547635 bp Feature: gene Location: 1547757-1548206 bp Feature: domain Description: PinE Location: 1547766-1548198 bp Feature: domain Description: PinE Location: 1 547766-1 5481 98 bp Feature: gene Location: 1549601-1551088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1550006-1550696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 550006-1 550696 bp Feature: gene Location: 1551081-1551587 bp Feature: domain Description: PRK10276 Location: 1551171-1551582 bp Feature: domain Description: PRK1 0276 Location: 1 551 1 71 -1 551 582 bp Feature: gene Location: 1551589-1552854 bp Feature: domain Description: umuC Location: 1551592-1552852 bp Feature: domain Description: umuC Location: 1 551 592-1 552852 bp Feature: gene Location: 2754895-2755953 bp Feature: domain Description: YccC Location: 2754901-2755939 bp Feature: domain Description: YccC Location: 2754901 -2755939 bp Feature: gene Location: 2756052-2756525 bp Feature: domain Description: PRK10016 Location: 2756055-2756514 bp Feature: domain Description: PRK1 001 6 Location: 2756055-275651 4 bp Feature: gene Location: 2756607-2758094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2757012-2757702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275701 2-2757702 bp Feature: gene Location: 2758612-2759775 bp Feature: domain Description: dacD Location: 2758615-2759770 bp Feature: domain Description: dacD Location: 275861 5-2759770 bp Feature: gene Location: 2759956-2761380 bp Feature: domain Description: SbcB Location: 2759962-2761378 bp Feature: domain Description: SbcB Location: 2759962-2761 378 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KK737309.1 Klebsiella pneumoniae CHS 58 genomic scaffold aedZa-supercont1.3, whole genome shotgun sequence (77181 bp)
Overview 1 RT 1: 73695-76889 bp Neighborhood of RT #1 [73695, 77181] umuC PRK10276 RVT-GII Feature: gene Location: 73695-74966 bp Feature: domain Description: umuC Location: 73698-74961 bp Feature: domain Description: umuC Location: 73698-74961 bp Feature: gene Location: 74966-75391 bp Feature: domain Description: PRK10276 Location: 74969-75377 bp Feature: domain Description: PRK102 76 Location: 74969-75377 bp Feature: gene Location: 75794-77181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76199-76889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76199-76889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII