myRT

myRT report for GCA_000694115.1_Kleb_pneu_CHS_59_V1

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Seq: KK737323.1 Klebsiella pneumoniae CHS 59 genomic scaffold aeeaa-supercont1.1, whole genome shotgun sequence (5416458 bp)
Overview 1 RT 1: 587012-590419 bp 2 RT 2: 1031128-1036733 bp 3 RT 3: 1039678-1045185 bp 4 RT 4: 1376511-1381929 bp 5 RT 5: 1567319-1573043 bp 6 RT 6: 2770840-2777323 bp Neighborhood of RT #1 [587012, 590520] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1031128, 1036759] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1039678, 1045190] dam Phage_GPA RVT-GII DinI Neighborhood of RT #4 [1376511, 1381931] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #5 [1567319, 1573045] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #6 [2770840, 2777325] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 587012-587743 bp Feature: domain Description: Laminin_G_3 Location: 587333-587687 bp Feature: domain Description: Laminin_G_3 Location: 587333-587687 bp Feature: gene Location: 587740-587949 bp Feature: gene Location: 588399-589886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 588804-589494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 588804-589494 bp Feature: gene Location: 589964-590203 bp Feature: gene Location: 590203-590520 bp Feature: domain Description: PRK10276 Location: 590209-590323 bp Feature: domain Description: PRK1 0276 Location: 590209-590323 bp Feature: domain Description: PRK10276 Location: 590350-590419 bp Feature: domain Description: PRK1 0276 Location: 590350-59041 9 bp Feature: gene Location: 1031128-1031691 bp Feature: domain Description: YbjK Location: 1031134-1031671 bp Feature: domain Description: YbjK Location: 1 031 1 34-1 031 671 bp Feature: gene Location: 1031814-1032866 bp Feature: domain Description: int Location: 1031817-1032816 bp Feature: domain Description: int Location: 1 031 81 7-1 03281 6 bp Feature: gene Location: 1033282-1034769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1033687-1034377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 033687-1 034377 bp Feature: gene Location: 1034868-1035812 bp Feature: gene Location: 1035824-1036759 bp Feature: domain Description: Phage_CI_repr Location: 1035908-1036091 bp Feature: domain Description: Phage_CI_repr Location: 1 035908-1 036091 bp Feature: domain Description: Phage_CI_repr Location: 1036220-1036412 bp Feature: domain Description: Phage_CI_repr Location: 1 036220-1 03641 2 bp Feature: domain Description: Phage_CI_C Location: 1036439-1036733 bp Feature: domain Description: Phage_CI_C Location: 1 036439-1 036733 bp Feature: gene Location: 1039678-1040283 bp Feature: domain Description: dam Location: 1039684-1040206 bp Feature: domain Description: dam Location: 1 039684-1 040206 bp Feature: gene Location: 1040280-1042694 bp Feature: domain Description: Phage_GPA Location: 1040844-1041810 bp Feature: domain Description: Phage_GPA Location: 1 040844-1 041 81 0 bp Feature: gene Location: 1043170-1044657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1043575-1044265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 043575-1 044265 bp Feature: gene Location: 1044758-1044946 bp Feature: gene Location: 1044957-1045190 bp Feature: domain Description: DinI Location: 1044999-1045185 bp Feature: domain Description: DinI Location: 1 044999-1 0451 85 bp Feature: gene Location: 1376511-1377650 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1376694-1377594 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 376694-1 377594 bp Feature: gene Location: 1377821-1378063 bp Feature: domain Description: DinI Location: 1377872-1378052 bp Feature: domain Description: DinI Location: 1 377872-1 378052 bp Feature: gene Location: 1378678-1380165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1379083-1379773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 379083-1 379773 bp Feature: gene Location: 1380244-1380663 bp Feature: domain Description: PRK10276 Location: 1380247-1380658 bp Feature: domain Description: PRK1 0276 Location: 1 380247-1 380658 bp Feature: gene Location: 1380666-1381931 bp Feature: domain Description: umuC Location: 1380669-1381929 bp Feature: domain Description: umuC Location: 1 380669-1 381 929 bp Feature: gene Location: 1567319-1567882 bp Feature: domain Description: Rve Location: 1567322-1567826 bp Feature: domain Description: Rve Location: 1 567322-1 567826 bp Feature: gene Location: 1567948-1568397 bp Feature: domain Description: PinE Location: 1567957-1568389 bp Feature: domain Description: PinE Location: 1 567957-1 568389 bp Feature: gene Location: 1569792-1571279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1570197-1570887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5701 97-1 570887 bp Feature: gene Location: 1571272-1571778 bp Feature: domain Description: PRK10276 Location: 1571362-1571773 bp Feature: domain Description: PRK1 0276 Location: 1 571 362-1 571 773 bp Feature: gene Location: 1571780-1573045 bp Feature: domain Description: umuC Location: 1571783-1573043 bp Feature: domain Description: umuC Location: 1 571 783-1 573043 bp Feature: gene Location: 2770840-2771898 bp Feature: domain Description: YccC Location: 2770846-2771884 bp Feature: domain Description: YccC Location: 2770846-2771 884 bp Feature: gene Location: 2771997-2772470 bp Feature: domain Description: PRK10016 Location: 2772000-2772459 bp Feature: domain Description: PRK1 001 6 Location: 2772000-2772459 bp Feature: gene Location: 2772552-2774039 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2772957-2773647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2772957-2773647 bp Feature: gene Location: 2774557-2775720 bp Feature: domain Description: dacD Location: 2774560-2775715 bp Feature: domain Description: dacD Location: 2774560-277571 5 bp Feature: gene Location: 2775901-2777325 bp Feature: domain Description: SbcB Location: 2775907-2777323 bp Feature: domain Description: SbcB Location: 2775907-2777323 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), dam (TIGR00571), Phage_GPA (pfam05840), DinI (pfam06183)
GT9_LPS_heptosyltransferase (cd03789), umuC (PRK03609), Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KK737326.1 Klebsiella pneumoniae CHS 59 genomic scaffold aeeaa-supercont1.4, whole genome shotgun sequence (77007 bp)
Overview 1 RT 1: 69605-74596 bp Neighborhood of RT #1 [69605, 74601] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 69605-70030 bp Feature: domain Description: Antirestrict Location: 69740-70028 bp Feature: domain Description: Antirestrict Location: 69740-7002 8 bp Feature: gene Location: 70551-70781 bp Feature: gene Location: 71015-72502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71420-72110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7142 0-72 110 bp Feature: gene Location: 72905-73330 bp Feature: domain Description: PRK10276 Location: 72908-73316 bp Feature: domain Description: PRK102 76 Location: 72 908-73316 bp Feature: gene Location: 73330-74601 bp Feature: domain Description: umuC Location: 73333-74596 bp Feature: domain Description: umuC Location: 73333-74596 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)