myRT

myRT report for GCA_000694155.1_Kleb_pneu_CHS_62_V1

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Seq: KK737344.1 Klebsiella pneumoniae CHS 62 genomic scaffold aeeae-supercont1.5, whole genome shotgun sequence (52654 bp)
Overview 1 RT 1: 36013-41495 bp Neighborhood of RT #1 [36013, 41503] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 umuC Feature: gene Location: 36013-36684 bp Feature: domain Description: Plasmid_stab_B Location: 36028-36235 bp Feature: domain Description: Plasmid_stab_B Location: 36028-36235 bp Feature: domain Description: Plasmid_stab_B Location: 36340-36547 bp Feature: domain Description: Plasmid_stab_B Location: 36340-36547 bp Feature: gene Location: 36687-37658 bp Feature: domain Description: StbA Location: 36690-37635 bp Feature: domain Description: StbA Location: 36690-37635 bp Feature: gene Location: 38231-39718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38636-39326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38636-39326 bp Feature: gene Location: 39801-40232 bp Feature: domain Description: PRK10276 Location: 39852-40215 bp Feature: domain Description: PRK1 0276 Location: 39852-4021 5 bp Feature: gene Location: 40232-41503 bp Feature: domain Description: umuC Location: 40235-41495 bp Feature: domain Description: umuC Location: 40235-41 495 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KK737340.1 Klebsiella pneumoniae CHS 62 genomic scaffold aeeae-supercont1.1, whole genome shotgun sequence (4017872 bp)
Overview 1 RT 1: 1-5167 bp 2 RT 2: 1371002-1377485 bp Neighborhood of RT #1 [1, 5169] RVT-GII PRK10276 umuC Neighborhood of RT #2 [1371002, 1377487] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 1-521 bp Feature: gene Location: 1916-3403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2321-3011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 32 1-3011 bp Feature: gene Location: 3396-3902 bp Feature: domain Description: PRK10276 Location: 3486-3897 bp Feature: domain Description: PRK102 76 Location: 3486-3897 bp Feature: gene Location: 3904-5169 bp Feature: domain Description: umuC Location: 3907-5167 bp Feature: domain Description: umuC Location: 3907-5167 bp Feature: gene Location: 1371002-1372060 bp Feature: domain Description: YccC Location: 1371008-1372046 bp Feature: domain Description: YccC Location: 1371008-1372 046 bp Feature: gene Location: 1372159-1372632 bp Feature: domain Description: PRK10016 Location: 1372162-1372621 bp Feature: domain Description: PRK10016 Location: 1372 162 -1372 62 1 bp Feature: gene Location: 1372714-1374201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1373119-1373809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1373119-1373809 bp Feature: gene Location: 1374719-1375882 bp Feature: domain Description: dacD Location: 1374722-1375877 bp Feature: domain Description: dacD Location: 137472 2 -1375877 bp Feature: gene Location: 1376063-1377487 bp Feature: domain Description: SbcB Location: 1376069-1377485 bp Feature: domain Description: SbcB Location: 1376069-1377485 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KK737348.1 Klebsiella pneumoniae CHS 62 genomic scaffold aeeae-supercont1.9, whole genome shotgun sequence (24431 bp)
Overview 1 RT 1: 20945-24139 bp Neighborhood of RT #1 [20945, 24431] umuC PRK10276 RVT-GII Feature: gene Location: 20945-22216 bp Feature: domain Description: umuC Location: 20948-22211 bp Feature: domain Description: umuC Location: 20948-22211 bp Feature: gene Location: 22216-22641 bp Feature: domain Description: PRK10276 Location: 22219-22627 bp Feature: domain Description: PRK10276 Location: 22219-22627 bp Feature: gene Location: 23044-24431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23449-24139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 449-2413 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: KK737341.1 Klebsiella pneumoniae CHS 62 genomic scaffold aeeae-supercont1.2, whole genome shotgun sequence (1548612 bp)
Overview 1 RT 1: 585533-588940 bp 2 RT 2: 1028173-1033778 bp 3 RT 3: 1371461-1376879 bp Neighborhood of RT #1 [585533, 589041] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1028173, 1033804] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1371461, 1376881] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 585533-586264 bp Feature: domain Description: Laminin_G_3 Location: 585854-586208 bp Feature: domain Description: Laminin_G_3 Location: 585854 -586208 bp Feature: gene Location: 586261-586470 bp Feature: gene Location: 586920-588407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 587325-588015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 587325-588015 bp Feature: gene Location: 588485-588724 bp Feature: gene Location: 588724-589041 bp Feature: domain Description: PRK10276 Location: 588730-588844 bp Feature: domain Description: PRK10276 Location: 588730-58884 4 bp Feature: domain Description: PRK10276 Location: 588871-588940 bp Feature: domain Description: PRK10276 Location: 588871-58894 0 bp Feature: gene Location: 1028173-1028736 bp Feature: domain Description: YbjK Location: 1028179-1028716 bp Feature: domain Description: YbjK Location: 1028179-1028716 bp Feature: gene Location: 1028859-1029911 bp Feature: domain Description: int Location: 1028862-1029861 bp Feature: domain Description: int Location: 1028862-1029861 bp Feature: gene Location: 1030327-1031814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1030732-1031422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1030732-10314 22 bp Feature: gene Location: 1031913-1032857 bp Feature: gene Location: 1032869-1033804 bp Feature: domain Description: Phage_CI_repr Location: 1032953-1033136 bp Feature: domain Description: Phage_CI_repr Location: 1032953-1033136 bp Feature: domain Description: Phage_CI_repr Location: 1033265-1033457 bp Feature: domain Description: Phage_CI_repr Location: 1033265-10334 57 bp Feature: domain Description: Phage_CI_C Location: 1033484-1033778 bp Feature: domain Description: Phage_CI_C Location: 10334 84 -1033778 bp Feature: gene Location: 1371461-1372600 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1371644-1372544 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 137164 4 -137254 4 bp Feature: gene Location: 1372771-1373013 bp Feature: domain Description: DinI Location: 1372822-1373002 bp Feature: domain Description: DinI Location: 1372822-1373002 bp Feature: gene Location: 1373628-1375115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1374033-1374723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1374 033-1374 723 bp Feature: gene Location: 1375194-1375613 bp Feature: domain Description: PRK10276 Location: 1375197-1375608 bp Feature: domain Description: PRK10276 Location: 1375197-1375608 bp Feature: gene Location: 1375616-1376881 bp Feature: domain Description: umuC Location: 1375619-1376879 bp Feature: domain Description: umuC Location: 1375619-1376879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)