myRT

myRT report for GCA_000694175.1_Kleb_pneu_CHS_63_V1

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Seq: KK737350.1 Klebsiella pneumoniae CHS 63 genomic scaffold aedZs-supercont1.1, whole genome shotgun sequence (4954026 bp)
Overview 1 RT 1: 583275-586682 bp 2 RT 2: 1025917-1031522 bp 3 RT 3: 1369285-1374703 bp 4 RT 4: 1546901-1552766 bp 5 RT 5: 2925652-2932135 bp Neighborhood of RT #1 [583275, 586783] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1025917, 1031548] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369285, 1374705] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1546901, 1552768] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2925652, 2932137] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 583275-584006 bp Feature: domain Description: Laminin_G_3 Location: 583596-583950 bp Feature: domain Description: Laminin_G_3 Location: 583596-583950 bp Feature: gene Location: 584003-584212 bp Feature: gene Location: 584665-586149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585067-585757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585067-585757 bp Feature: gene Location: 586227-586466 bp Feature: gene Location: 586466-586783 bp Feature: domain Description: PRK10276 Location: 586472-586586 bp Feature: domain Description: PRK1 0276 Location: 586472-586586 bp Feature: domain Description: PRK10276 Location: 586613-586682 bp Feature: domain Description: PRK1 0276 Location: 58661 3-586682 bp Feature: gene Location: 1025917-1026480 bp Feature: domain Description: YbjK Location: 1025923-1026460 bp Feature: domain Description: YbjK Location: 1 025923-1 026460 bp Feature: gene Location: 1026603-1027655 bp Feature: domain Description: int Location: 1026606-1027605 bp Feature: domain Description: int Location: 1 026606-1 027605 bp Feature: gene Location: 1028074-1029558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028476-1029166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 028476-1 0291 66 bp Feature: gene Location: 1029657-1030601 bp Feature: gene Location: 1030613-1031548 bp Feature: domain Description: Phage_CI_repr Location: 1030697-1030880 bp Feature: domain Description: Phage_CI_repr Location: 1 030697-1 030880 bp Feature: domain Description: Phage_CI_repr Location: 1031009-1031201 bp Feature: domain Description: Phage_CI_repr Location: 1 031 009-1 031 201 bp Feature: domain Description: Phage_CI_C Location: 1031228-1031522 bp Feature: domain Description: Phage_CI_C Location: 1 031 228-1 031 522 bp Feature: gene Location: 1369285-1370424 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369468-1370368 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 369468-1 370368 bp Feature: gene Location: 1370595-1370837 bp Feature: domain Description: DinI Location: 1370646-1370826 bp Feature: domain Description: DinI Location: 1 370646-1 370826 bp Feature: gene Location: 1371455-1372939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1371857-1372547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 371 857-1 372547 bp Feature: gene Location: 1373018-1373437 bp Feature: domain Description: PRK10276 Location: 1373021-1373432 bp Feature: domain Description: PRK1 0276 Location: 1 373021 -1 373432 bp Feature: gene Location: 1373440-1374705 bp Feature: domain Description: umuC Location: 1373443-1374703 bp Feature: domain Description: umuC Location: 1 373443-1 374703 bp Feature: gene Location: 1546901-1547605 bp Feature: domain Description: Rve Location: 1546904-1547549 bp Feature: domain Description: Rve Location: 1 546904-1 547549 bp Feature: gene Location: 1547671-1548120 bp Feature: domain Description: PinE Location: 1547680-1548112 bp Feature: domain Description: PinE Location: 1 547680-1 5481 1 2 bp Feature: gene Location: 1549518-1551002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1549920-1550610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 549920-1 55061 0 bp Feature: gene Location: 1550995-1551501 bp Feature: domain Description: PRK10276 Location: 1551085-1551496 bp Feature: domain Description: PRK1 0276 Location: 1 551 085-1 551 496 bp Feature: gene Location: 1551503-1552768 bp Feature: domain Description: umuC Location: 1551506-1552766 bp Feature: domain Description: umuC Location: 1 551 506-1 552766 bp Feature: gene Location: 2925652-2926710 bp Feature: domain Description: YccC Location: 2925658-2926696 bp Feature: domain Description: YccC Location: 2925658-2926696 bp Feature: gene Location: 2926809-2927282 bp Feature: domain Description: PRK10016 Location: 2926812-2927271 bp Feature: domain Description: PRK1 001 6 Location: 292681 2-2927271 bp Feature: gene Location: 2927364-2928848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2927766-2928456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2927766-2928456 bp Feature: gene Location: 2929369-2930532 bp Feature: domain Description: dacD Location: 2929372-2930527 bp Feature: domain Description: dacD Location: 2929372-2930527 bp Feature: gene Location: 2930713-2932137 bp Feature: domain Description: SbcB Location: 2930719-2932135 bp Feature: domain Description: SbcB Location: 293071 9-29321 35 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)