myRT

myRT report for GCA_000694195.1_Kleb_pneu_CHS_64_V1

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Seq: KK737355.1 Klebsiella pneumoniae CHS 64 genomic scaffold aedYM-supercont1.2, whole genome shotgun sequence (1553294 bp)
Overview 1 RT 1: 583709-587116 bp 2 RT 2: 1026886-1032491 bp 3 RT 3: 1370164-1375582 bp Neighborhood of RT #1 [583709, 587217] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026886, 1032517] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1370164, 1375584] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 583709-584440 bp Feature: domain Description: Laminin_G_3 Location: 584030-584384 bp Feature: domain Description: Laminin_G_3 Location: 584030-584384 bp Feature: gene Location: 584437-584646 bp Feature: gene Location: 585096-586583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585501-586191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585501 -5861 91 bp Feature: gene Location: 586661-586900 bp Feature: gene Location: 586900-587217 bp Feature: domain Description: PRK10276 Location: 586906-587020 bp Feature: domain Description: PRK1 0276 Location: 586906-587020 bp Feature: domain Description: PRK10276 Location: 587047-587116 bp Feature: domain Description: PRK1 0276 Location: 587047-5871 1 6 bp Feature: gene Location: 1026886-1027449 bp Feature: domain Description: YbjK Location: 1026892-1027429 bp Feature: domain Description: YbjK Location: 1 026892-1 027429 bp Feature: gene Location: 1027572-1028624 bp Feature: domain Description: int Location: 1027575-1028574 bp Feature: domain Description: int Location: 1 027575-1 028574 bp Feature: gene Location: 1029040-1030527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029445-1030135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 029445-1 0301 35 bp Feature: gene Location: 1030626-1031570 bp Feature: gene Location: 1031582-1032517 bp Feature: domain Description: Phage_CI_repr Location: 1031666-1031849 bp Feature: domain Description: Phage_CI_repr Location: 1 031 666-1 031 849 bp Feature: domain Description: Phage_CI_repr Location: 1031978-1032170 bp Feature: domain Description: Phage_CI_repr Location: 1 031 978-1 0321 70 bp Feature: domain Description: Phage_CI_C Location: 1032197-1032491 bp Feature: domain Description: Phage_CI_C Location: 1 0321 97-1 032491 bp Feature: gene Location: 1370164-1371303 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1370347-1371247 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 370347-1 371 247 bp Feature: gene Location: 1371474-1371716 bp Feature: domain Description: DinI Location: 1371525-1371705 bp Feature: domain Description: DinI Location: 1 371 525-1 371 705 bp Feature: gene Location: 1372331-1373818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372736-1373426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 372736-1 373426 bp Feature: gene Location: 1373897-1374316 bp Feature: domain Description: PRK10276 Location: 1373900-1374311 bp Feature: domain Description: PRK1 0276 Location: 1 373900-1 37431 1 bp Feature: gene Location: 1374319-1375584 bp Feature: domain Description: umuC Location: 1374322-1375582 bp Feature: domain Description: umuC Location: 1 374322-1 375582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)

Seq: KK737356.1 Klebsiella pneumoniae CHS 64 genomic scaffold aedYM-supercont1.3, whole genome shotgun sequence (156177 bp)
Overview 1 RT 1: 88667-93658 bp Neighborhood of RT #1 [88667, 93663] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 88667-89092 bp Feature: domain Description: Antirestrict Location: 88802-89090 bp Feature: domain Description: Antirestrict Location: 88802 -89090 bp Feature: gene Location: 89613-89843 bp Feature: gene Location: 90077-91564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90482-91172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90482 -91172 bp Feature: gene Location: 91967-92392 bp Feature: domain Description: PRK10276 Location: 91970-92378 bp Feature: domain Description: PRK102 76 Location: 91970-92 378 bp Feature: gene Location: 92392-93663 bp Feature: domain Description: umuC Location: 92395-93658 bp Feature: domain Description: umuC Location: 92 395-93658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KK737354.1 Klebsiella pneumoniae CHS 64 genomic scaffold aedYM-supercont1.1, whole genome shotgun sequence (4017735 bp)
Overview 1 RT 1: 106-5201 bp 2 RT 2: 1375160-1381643 bp Neighborhood of RT #1 [106, 5203] PinE RVT-GII PRK10276 umuC Neighborhood of RT #2 [1375160, 1381645] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 106-555 bp Feature: domain Description: PinE Location: 115-547 bp Feature: domain Description: PinE Location: 115-547 bp Feature: gene Location: 1950-3437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2355-3045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 55-3 045 bp Feature: gene Location: 3430-3936 bp Feature: domain Description: PRK10276 Location: 3520-3931 bp Feature: domain Description: PRK10276 Location: 3 520-3 93 1 bp Feature: gene Location: 3938-5203 bp Feature: domain Description: umuC Location: 3941-5201 bp Feature: domain Description: umuC Location: 3 941-5201 bp Feature: gene Location: 1375160-1376218 bp Feature: domain Description: YccC Location: 1375166-1376204 bp Feature: domain Description: YccC Location: 13 75166-13 76204 bp Feature: gene Location: 1376317-1376790 bp Feature: domain Description: PRK10016 Location: 1376320-1376779 bp Feature: domain Description: PRK10016 Location: 13 763 20-13 76779 bp Feature: gene Location: 1376872-1378359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1377277-1377967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 77277-13 77967 bp Feature: gene Location: 1378877-1380040 bp Feature: domain Description: dacD Location: 1378880-1380035 bp Feature: domain Description: dacD Location: 13 78880-13 8003 5 bp Feature: gene Location: 1380221-1381645 bp Feature: domain Description: SbcB Location: 1380227-1381643 bp Feature: domain Description: SbcB Location: 13 80227-13 81643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)