myRT

myRT report for GCA_000694275.1_Kleb_pneu_CHS_70_V1

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Seq: KK737400.1 Klebsiella pneumoniae CHS 70 genomic scaffold aedZn-supercont1.3, whole genome shotgun sequence (584556 bp)
Overview 1 RT 1: 37433-43298 bp Neighborhood of RT #1 [37433, 43300] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 37433-38137 bp Feature: domain Description: Rve Location: 37436-38081 bp Feature: domain Description: Rve Location: 37436-38081 bp Feature: gene Location: 38203-38652 bp Feature: domain Description: PinE Location: 38212-38644 bp Feature: domain Description: PinE Location: 3821 2-38644 bp Feature: gene Location: 40047-41534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40452-41142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40452-41 1 42 bp Feature: gene Location: 41527-42033 bp Feature: domain Description: PRK10276 Location: 41617-42028 bp Feature: domain Description: PRK1 0276 Location: 41 61 7-42028 bp Feature: gene Location: 42035-43300 bp Feature: domain Description: umuC Location: 42038-43298 bp Feature: domain Description: umuC Location: 42038-43298 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KK737399.1 Klebsiella pneumoniae CHS 70 genomic scaffold aedZn-supercont1.2, whole genome shotgun sequence (1550018 bp)
Overview 1 RT 1: 583394-586801 bp 2 RT 2: 1026036-1031641 bp 3 RT 3: 1034586-1040093 bp 4 RT 4: 1371234-1376652 bp Neighborhood of RT #1 [583394, 586902] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026036, 1031667] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1034586, 1040098] dam Phage_GPA RVT-GII DinI Neighborhood of RT #4 [1371234, 1376654] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 583394-584125 bp Feature: domain Description: Laminin_G_3 Location: 583715-584069 bp Feature: domain Description: Laminin_G_3 Location: 583715-584069 bp Feature: gene Location: 584122-584331 bp Feature: gene Location: 584781-586268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585186-585876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585186-585876 bp Feature: gene Location: 586346-586585 bp Feature: gene Location: 586585-586902 bp Feature: domain Description: PRK10276 Location: 586591-586705 bp Feature: domain Description: PRK102 76 Location: 586591-586705 bp Feature: domain Description: PRK10276 Location: 586732-586801 bp Feature: domain Description: PRK102 76 Location: 586732 -586801 bp Feature: gene Location: 1026036-1026599 bp Feature: domain Description: YbjK Location: 1026042-1026579 bp Feature: domain Description: YbjK Location: 102 6042 -102 6579 bp Feature: gene Location: 1026722-1027774 bp Feature: domain Description: int Location: 1026725-1027724 bp Feature: domain Description: int Location: 102 672 5-102 772 4 bp Feature: gene Location: 1028190-1029677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028595-1029285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 8595-102 92 85 bp Feature: gene Location: 1029776-1030720 bp Feature: gene Location: 1030732-1031667 bp Feature: domain Description: Phage_CI_repr Location: 1030816-1030999 bp Feature: domain Description: Phage_CI_repr Location: 1030816-1030999 bp Feature: domain Description: Phage_CI_repr Location: 1031128-1031320 bp Feature: domain Description: Phage_CI_repr Location: 103112 8-103132 0 bp Feature: domain Description: Phage_CI_C Location: 1031347-1031641 bp Feature: domain Description: Phage_CI_C Location: 1031347-1031641 bp Feature: gene Location: 1034586-1035191 bp Feature: domain Description: dam Location: 1034592-1035114 bp Feature: domain Description: dam Location: 1034592 -1035114 bp Feature: gene Location: 1035188-1037602 bp Feature: domain Description: Phage_GPA Location: 1035752-1036718 bp Feature: domain Description: Phage_GPA Location: 1035752 -1036718 bp Feature: gene Location: 1038078-1039565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1038483-1039173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1038483-1039173 bp Feature: gene Location: 1039666-1039854 bp Feature: gene Location: 1039865-1040098 bp Feature: domain Description: DinI Location: 1039907-1040093 bp Feature: domain Description: DinI Location: 1039907-1040093 bp Feature: gene Location: 1371234-1372373 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1371417-1372317 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1371417-1372 317 bp Feature: gene Location: 1372544-1372786 bp Feature: domain Description: DinI Location: 1372595-1372775 bp Feature: domain Description: DinI Location: 1372 595-1372 775 bp Feature: gene Location: 1373401-1374888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1373806-1374496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1373806-1374496 bp Feature: gene Location: 1374967-1375386 bp Feature: domain Description: PRK10276 Location: 1374970-1375381 bp Feature: domain Description: PRK102 76 Location: 1374970-1375381 bp Feature: gene Location: 1375389-1376654 bp Feature: domain Description: umuC Location: 1375392-1376652 bp Feature: domain Description: umuC Location: 1375392 -1376652 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), dam (TIGR00571), Phage_GPA (pfam05840), DinI (pfam06183)
GT9_LPS_heptosyltransferase (cd03789), umuC (PRK03609)

Seq: KK737401.1 Klebsiella pneumoniae CHS 70 genomic scaffold aedZn-supercont1.4, whole genome shotgun sequence (209350 bp)
Overview 1 RT 1: 89241-94232 bp Neighborhood of RT #1 [89241, 94237] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 89241-89666 bp Feature: domain Description: Antirestrict Location: 89376-89664 bp Feature: domain Description: Antirestrict Location: 893 76-89664 bp Feature: gene Location: 90187-90417 bp Feature: gene Location: 90651-92138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91056-91746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91056-91746 bp Feature: gene Location: 92541-92966 bp Feature: domain Description: PRK10276 Location: 92544-92952 bp Feature: domain Description: PRK10276 Location: 92544-92952 bp Feature: gene Location: 92966-94237 bp Feature: domain Description: umuC Location: 92969-94232 bp Feature: domain Description: umuC Location: 92969-9423 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KK737398.1 Klebsiella pneumoniae CHS 70 genomic scaffold aedZn-supercont1.1, whole genome shotgun sequence (3558523 bp)
Overview 1 RT 1: 902418-908901 bp Neighborhood of RT #1 [902418, 908903] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 902418-903476 bp Feature: domain Description: YccC Location: 902424-903462 bp Feature: domain Description: YccC Location: 9024 24 -9034 62 bp Feature: gene Location: 903575-904048 bp Feature: domain Description: PRK10016 Location: 903578-904037 bp Feature: domain Description: PRK10016 Location: 903578-904 037 bp Feature: gene Location: 904130-905617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 904535-905225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 904 535-905225 bp Feature: gene Location: 906135-907298 bp Feature: domain Description: dacD Location: 906138-907293 bp Feature: domain Description: dacD Location: 906138-907293 bp Feature: gene Location: 907479-908903 bp Feature: domain Description: SbcB Location: 907485-908901 bp Feature: domain Description: SbcB Location: 9074 85-908901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)