myRT

myRT report for GCA_000694295.1_Kleb_pneu_CHS_71_V1

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Seq: KK737407.1 Klebsiella pneumoniae CHS 71 genomic scaffold aedYV-supercont1.3, whole genome shotgun sequence (547921 bp)
Overview 1 RT 1: 65345-71210 bp Neighborhood of RT #1 [65345, 71212] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 65345-66049 bp Feature: domain Description: Rve Location: 65348-65993 bp Feature: domain Description: Rve Location: 65348-65993 bp Feature: gene Location: 66115-66564 bp Feature: domain Description: PinE Location: 66124-66556 bp Feature: domain Description: PinE Location: 661 24-66556 bp Feature: gene Location: 67959-69446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68364-69054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68364-69054 bp Feature: gene Location: 69439-69945 bp Feature: domain Description: PRK10276 Location: 69529-69940 bp Feature: domain Description: PRK1 0276 Location: 69529-69940 bp Feature: gene Location: 69947-71212 bp Feature: domain Description: umuC Location: 69950-71210 bp Feature: domain Description: umuC Location: 69950-71 21 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KK737405.1 Klebsiella pneumoniae CHS 71 genomic scaffold aedYV-supercont1.1, whole genome shotgun sequence (3546864 bp)
Overview 1 RT 1: 884917-891400 bp Neighborhood of RT #1 [884917, 891402] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 884917-885975 bp Feature: domain Description: YccC Location: 884923-885961 bp Feature: domain Description: YccC Location: 88492 3-885961 bp Feature: gene Location: 886074-886547 bp Feature: domain Description: PRK10016 Location: 886077-886536 bp Feature: domain Description: PRK10016 Location: 886077-886536 bp Feature: gene Location: 886629-888116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 887034-887724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 887034-88772 4 bp Feature: gene Location: 888634-889797 bp Feature: domain Description: dacD Location: 888637-889792 bp Feature: domain Description: dacD Location: 888637-889792 bp Feature: gene Location: 889978-891402 bp Feature: domain Description: SbcB Location: 889984-891400 bp Feature: domain Description: SbcB Location: 889984-891400 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KK737409.1 Klebsiella pneumoniae CHS 71 genomic scaffold aedYV-supercont1.5, whole genome shotgun sequence (69722 bp)
Overview 1 RT 1: 66236-69430 bp Neighborhood of RT #1 [66236, 69722] umuC PRK10276 RVT-GII Feature: gene Location: 66236-67507 bp Feature: domain Description: umuC Location: 66239-67502 bp Feature: domain Description: umuC Location: 6623 9-67502 bp Feature: gene Location: 67507-67932 bp Feature: domain Description: PRK10276 Location: 67510-67918 bp Feature: domain Description: PRK10276 Location: 67510-67918 bp Feature: gene Location: 68335-69722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68740-69430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68740-6943 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: KK737406.1 Klebsiella pneumoniae CHS 71 genomic scaffold aedYV-supercont1.2, whole genome shotgun sequence (1549933 bp)
Overview 1 RT 1: 585774-589181 bp 2 RT 2: 1029614-1035219 bp 3 RT 3: 1372782-1378200 bp Neighborhood of RT #1 [585774, 589282] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1029614, 1035245] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1372782, 1378202] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 585774-586505 bp Feature: domain Description: Laminin_G_3 Location: 586095-586449 bp Feature: domain Description: Laminin_G_3 Location: 586095-5864 4 9 bp Feature: gene Location: 586502-586711 bp Feature: gene Location: 587161-588648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 587566-588256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 587566-588256 bp Feature: gene Location: 588726-588965 bp Feature: gene Location: 588965-589282 bp Feature: domain Description: PRK10276 Location: 588971-589085 bp Feature: domain Description: PRK10276 Location: 588971-589085 bp Feature: domain Description: PRK10276 Location: 589112-589181 bp Feature: domain Description: PRK10276 Location: 589112-589181 bp Feature: gene Location: 1029614-1030177 bp Feature: domain Description: YbjK Location: 1029620-1030157 bp Feature: domain Description: YbjK Location: 1029620-1030157 bp Feature: gene Location: 1030300-1031352 bp Feature: domain Description: int Location: 1030303-1031302 bp Feature: domain Description: int Location: 1030303-1031302 bp Feature: gene Location: 1031768-1033255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1032173-1032863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1032173-1032863 bp Feature: gene Location: 1033354-1034298 bp Feature: gene Location: 1034310-1035245 bp Feature: domain Description: Phage_CI_repr Location: 1034394-1034577 bp Feature: domain Description: Phage_CI_repr Location: 1034 394 -1034 577 bp Feature: domain Description: Phage_CI_repr Location: 1034706-1034898 bp Feature: domain Description: Phage_CI_repr Location: 1034 706-1034 898 bp Feature: domain Description: Phage_CI_C Location: 1034925-1035219 bp Feature: domain Description: Phage_CI_C Location: 1034 925-1035219 bp Feature: gene Location: 1372782-1373921 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1372965-1373865 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1372965-1373865 bp Feature: gene Location: 1374092-1374334 bp Feature: domain Description: DinI Location: 1374143-1374323 bp Feature: domain Description: DinI Location: 1374 14 3-1374 323 bp Feature: gene Location: 1374949-1376436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1375354-1376044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1375354 -137604 4 bp Feature: gene Location: 1376515-1376934 bp Feature: domain Description: PRK10276 Location: 1376518-1376929 bp Feature: domain Description: PRK10276 Location: 1376518-1376929 bp Feature: gene Location: 1376937-1378202 bp Feature: domain Description: umuC Location: 1376940-1378200 bp Feature: domain Description: umuC Location: 137694 0-1378200 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)