myRT

myRT report for GCA_000694315.1_Kleb_pneu_CHS_72_V1

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Seq: KK737414.1 Klebsiella pneumoniae CHS 72 genomic scaffold aeeaB-supercont1.1, whole genome shotgun sequence (5584543 bp)
Overview 1 RT 1: 583332-586739 bp 2 RT 2: 1025972-1031577 bp 3 RT 3: 1369068-1374486 bp 4 RT 4: 1554333-1559428 bp 5 RT 5: 2926422-2932905 bp Neighborhood of RT #1 [583332, 586840] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1025972, 1031603] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369068, 1374488] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1554333, 1559430] PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2926422, 2932907] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 583332-584063 bp Feature: domain Description: Laminin_G_3 Location: 583653-584007 bp Feature: domain Description: Laminin_G_3 Location: 583653-584007 bp Feature: gene Location: 584060-584269 bp Feature: gene Location: 584719-586206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585124-585814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5851 24-58581 4 bp Feature: gene Location: 586284-586523 bp Feature: gene Location: 586523-586840 bp Feature: domain Description: PRK10276 Location: 586529-586643 bp Feature: domain Description: PRK1 0276 Location: 586529-586643 bp Feature: domain Description: PRK10276 Location: 586670-586739 bp Feature: domain Description: PRK1 0276 Location: 586670-586739 bp Feature: gene Location: 1025972-1026535 bp Feature: domain Description: YbjK Location: 1025978-1026515 bp Feature: domain Description: YbjK Location: 1 025978-1 02651 5 bp Feature: gene Location: 1026658-1027710 bp Feature: domain Description: int Location: 1026661-1027660 bp Feature: domain Description: int Location: 1 026661 -1 027660 bp Feature: gene Location: 1028126-1029613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028531-1029221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 028531 -1 029221 bp Feature: gene Location: 1029712-1030656 bp Feature: gene Location: 1030668-1031603 bp Feature: domain Description: Phage_CI_repr Location: 1030752-1030935 bp Feature: domain Description: Phage_CI_repr Location: 1 030752-1 030935 bp Feature: domain Description: Phage_CI_repr Location: 1031064-1031256 bp Feature: domain Description: Phage_CI_repr Location: 1 031 064-1 031 256 bp Feature: domain Description: Phage_CI_C Location: 1031283-1031577 bp Feature: domain Description: Phage_CI_C Location: 1 031 283-1 031 577 bp Feature: gene Location: 1369068-1370207 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369251-1370151 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 369251 -1 3701 51 bp Feature: gene Location: 1370378-1370620 bp Feature: domain Description: DinI Location: 1370429-1370609 bp Feature: domain Description: DinI Location: 1 370429-1 370609 bp Feature: gene Location: 1371235-1372722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1371640-1372330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 371 640-1 372330 bp Feature: gene Location: 1372801-1373220 bp Feature: domain Description: PRK10276 Location: 1372804-1373215 bp Feature: domain Description: PRK1 0276 Location: 1 372804-1 37321 5 bp Feature: gene Location: 1373223-1374488 bp Feature: domain Description: umuC Location: 1373226-1374486 bp Feature: domain Description: umuC Location: 1 373226-1 374486 bp Feature: gene Location: 1554333-1554782 bp Feature: domain Description: PinE Location: 1554342-1554774 bp Feature: domain Description: PinE Location: 1 554342-1 554774 bp Feature: gene Location: 1556177-1557664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1556582-1557272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 556582-1 557272 bp Feature: gene Location: 1557657-1558163 bp Feature: domain Description: PRK10276 Location: 1557747-1558158 bp Feature: domain Description: PRK1 0276 Location: 1 557747-1 5581 58 bp Feature: gene Location: 1558165-1559430 bp Feature: domain Description: umuC Location: 1558168-1559428 bp Feature: domain Description: umuC Location: 1 5581 68-1 559428 bp Feature: gene Location: 2926422-2927480 bp Feature: domain Description: YccC Location: 2926428-2927466 bp Feature: domain Description: YccC Location: 2926428-2927466 bp Feature: gene Location: 2927579-2928052 bp Feature: domain Description: PRK10016 Location: 2927582-2928041 bp Feature: domain Description: PRK1 001 6 Location: 2927582-2928041 bp Feature: gene Location: 2928134-2929621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2928539-2929229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2928539-2929229 bp Feature: gene Location: 2930139-2931302 bp Feature: domain Description: dacD Location: 2930142-2931297 bp Feature: domain Description: dacD Location: 29301 42-2931 297 bp Feature: gene Location: 2931483-2932907 bp Feature: domain Description: SbcB Location: 2931489-2932905 bp Feature: domain Description: SbcB Location: 2931 489-2932905 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)