myRT

myRT report for GCA_000694335.1_Kleb_pneu_CHS_73_V1

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Seq: KK737422.1 Klebsiella pneumoniae CHS 73 genomic scaffold aedYT-supercont1.4, whole genome shotgun sequence (95283 bp)
Overview 1 RT 1: 91797-94991 bp Neighborhood of RT #1 [91797, 95283] umuC PRK10276 RVT-GII Feature: gene Location: 91797-93068 bp Feature: domain Description: umuC Location: 91800-93063 bp Feature: domain Description: umuC Location: 91 800-93063 bp Feature: gene Location: 93068-93493 bp Feature: domain Description: PRK10276 Location: 93071-93479 bp Feature: domain Description: PRK1 0276 Location: 93071 -93479 bp Feature: gene Location: 93896-95283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94301-94991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94301 -94991 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: KK737420.1 Klebsiella pneumoniae CHS 73 genomic scaffold aedYT-supercont1.2, whole genome shotgun sequence (1547473 bp)
Overview 1 RT 1: 584325-587732 bp 2 RT 2: 1026965-1032570 bp 3 RT 3: 1370349-1375767 bp Neighborhood of RT #1 [584325, 587833] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026965, 1032596] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1370349, 1375769] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 584325-585056 bp Feature: domain Description: Laminin_G_3 Location: 584646-585000 bp Feature: domain Description: Laminin_G_3 Location: 584646-585000 bp Feature: gene Location: 585053-585262 bp Feature: gene Location: 585712-587199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586117-586807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586117-586807 bp Feature: gene Location: 587277-587516 bp Feature: gene Location: 587516-587833 bp Feature: domain Description: PRK10276 Location: 587522-587636 bp Feature: domain Description: PRK102 76 Location: 58752 2 -587636 bp Feature: domain Description: PRK10276 Location: 587663-587732 bp Feature: domain Description: PRK102 76 Location: 587663-587732 bp Feature: gene Location: 1026965-1027528 bp Feature: domain Description: YbjK Location: 1026971-1027508 bp Feature: domain Description: YbjK Location: 102 6971-102 7508 bp Feature: gene Location: 1027651-1028703 bp Feature: domain Description: int Location: 1027654-1028653 bp Feature: domain Description: int Location: 102 7654-102 8653 bp Feature: gene Location: 1029119-1030606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029524-1030214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 952 4-10302 14 bp Feature: gene Location: 1030705-1031649 bp Feature: gene Location: 1031661-1032596 bp Feature: domain Description: Phage_CI_repr Location: 1031745-1031928 bp Feature: domain Description: Phage_CI_repr Location: 1031745-103192 8 bp Feature: domain Description: Phage_CI_repr Location: 1032057-1032249 bp Feature: domain Description: Phage_CI_repr Location: 1032 057-1032 2 49 bp Feature: domain Description: Phage_CI_C Location: 1032276-1032570 bp Feature: domain Description: Phage_CI_C Location: 1032 2 76-1032 570 bp Feature: gene Location: 1370349-1371488 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1370532-1371432 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1370532 -1371432 bp Feature: gene Location: 1371659-1371901 bp Feature: domain Description: DinI Location: 1371710-1371890 bp Feature: domain Description: DinI Location: 1371710-1371890 bp Feature: gene Location: 1372516-1374003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372921-1373611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372 92 1-1373611 bp Feature: gene Location: 1374082-1374501 bp Feature: domain Description: PRK10276 Location: 1374085-1374496 bp Feature: domain Description: PRK102 76 Location: 1374085-1374496 bp Feature: gene Location: 1374504-1375769 bp Feature: domain Description: umuC Location: 1374507-1375767 bp Feature: domain Description: umuC Location: 1374507-1375767 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)

Seq: KK737421.1 Klebsiella pneumoniae CHS 73 genomic scaffold aedYT-supercont1.3, whole genome shotgun sequence (497337 bp)
Overview 1 RT 1: 14915-20630 bp Neighborhood of RT #1 [14915, 20632] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 14915-15469 bp Feature: domain Description: Rve Location: 14918-15413 bp Feature: domain Description: Rve Location: 14918-15413 bp Feature: gene Location: 15535-15984 bp Feature: domain Description: PinE Location: 15544-15976 bp Feature: domain Description: PinE Location: 15544-15976 bp Feature: gene Location: 17379-18866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17784-18474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17784-18474 bp Feature: gene Location: 18859-19365 bp Feature: domain Description: PRK10276 Location: 18949-19360 bp Feature: domain Description: PRK10276 Location: 18949-193 60 bp Feature: gene Location: 19367-20632 bp Feature: domain Description: umuC Location: 19370-20630 bp Feature: domain Description: umuC Location: 193 70-2063 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KK737419.1 Klebsiella pneumoniae CHS 73 genomic scaffold aedYT-supercont1.1, whole genome shotgun sequence (3535756 bp)
Overview 1 RT 1: 883492-889975 bp Neighborhood of RT #1 [883492, 889977] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 883492-884550 bp Feature: domain Description: YccC Location: 883498-884536 bp Feature: domain Description: YccC Location: 8834 98-884 536 bp Feature: gene Location: 884649-885122 bp Feature: domain Description: PRK10016 Location: 884652-885111 bp Feature: domain Description: PRK10016 Location: 884 652-885111 bp Feature: gene Location: 885204-886691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885609-886299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885609-886299 bp Feature: gene Location: 887209-888372 bp Feature: domain Description: dacD Location: 887212-888367 bp Feature: domain Description: dacD Location: 887212-888367 bp Feature: gene Location: 888553-889977 bp Feature: domain Description: SbcB Location: 888559-889975 bp Feature: domain Description: SbcB Location: 888559-889975 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KK737423.1 Klebsiella pneumoniae CHS 73 genomic scaffold aedYT-supercont1.5, whole genome shotgun sequence (87429 bp)
Overview 1 RT 1: 70569-76051 bp Neighborhood of RT #1 [70569, 76059] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 umuC Feature: gene Location: 70569-71240 bp Feature: domain Description: Plasmid_stab_B Location: 70584-70791 bp Feature: domain Description: Plasmid_stab_B Location: 705 84-70791 bp Feature: domain Description: Plasmid_stab_B Location: 70896-71103 bp Feature: domain Description: Plasmid_stab_B Location: 70896-71103 bp Feature: gene Location: 71243-72214 bp Feature: domain Description: StbA Location: 71246-72191 bp Feature: domain Description: StbA Location: 71246-72191 bp Feature: gene Location: 72787-74274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73192-73882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73192-73882 bp Feature: gene Location: 74357-74788 bp Feature: domain Description: PRK10276 Location: 74408-74771 bp Feature: domain Description: PRK10276 Location: 74408-74771 bp Feature: gene Location: 74788-76059 bp Feature: domain Description: umuC Location: 74791-76051 bp Feature: domain Description: umuC Location: 74791-7605 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)