myRT

myRT report for GCA_000694415.1_Kleb_pneu_CHS_80_V1

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Seq: KK737467.1 Klebsiella pneumoniae CHS 80 genomic scaffold aedYP-supercont1.2, whole genome shotgun sequence (226202 bp)
Overview 1 RT 1: 131966-136960 bp Neighborhood of RT #1 [131966, 136962] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 131966-133237 bp Feature: domain Description: umuC Location: 131969-133232 bp Feature: domain Description: umuC Location: 1 31 969-1 33232 bp Feature: gene Location: 133237-133662 bp Feature: domain Description: PRK10276 Location: 133240-133648 bp Feature: domain Description: PRK1 0276 Location: 1 33240-1 33648 bp Feature: gene Location: 134065-135552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134470-135160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 34470-1 351 60 bp Feature: gene Location: 135786-136016 bp Feature: gene Location: 136537-136962 bp Feature: domain Description: Antirestrict Location: 136672-136960 bp Feature: domain Description: Antirestrict Location: 1 36672-1 36960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KK737466.1 Klebsiella pneumoniae CHS 80 genomic scaffold aedYP-supercont1.1, whole genome shotgun sequence (5576026 bp)
Overview 1 RT 1: 590332-593739 bp 2 RT 2: 1032641-1038246 bp 3 RT 3: 1375928-1381346 bp 4 RT 4: 1569704-1575569 bp 5 RT 5: 2912542-2919025 bp Neighborhood of RT #1 [590332, 593840] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1032641, 1038272] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1375928, 1381348] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1569704, 1575571] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2912542, 2919027] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 590332-591063 bp Feature: domain Description: Laminin_G_3 Location: 590653-591007 bp Feature: domain Description: Laminin_G_3 Location: 590653-591007 bp Feature: gene Location: 591060-591269 bp Feature: gene Location: 591719-593206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 592124-592814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 592 12 4-592 814 bp Feature: gene Location: 593284-593523 bp Feature: gene Location: 593523-593840 bp Feature: domain Description: PRK10276 Location: 593529-593643 bp Feature: domain Description: PRK102 76 Location: 59352 9-593643 bp Feature: domain Description: PRK10276 Location: 593670-593739 bp Feature: domain Description: PRK102 76 Location: 593670-593739 bp Feature: gene Location: 1032641-1033204 bp Feature: domain Description: YbjK Location: 1032647-1033184 bp Feature: domain Description: YbjK Location: 1032 647-1033184 bp Feature: gene Location: 1033327-1034379 bp Feature: domain Description: int Location: 1033330-1034329 bp Feature: domain Description: int Location: 1033330-103432 9 bp Feature: gene Location: 1034795-1036282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1035200-1035890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10352 00-1035890 bp Feature: gene Location: 1036381-1037325 bp Feature: gene Location: 1037337-1038272 bp Feature: domain Description: Phage_CI_repr Location: 1037421-1037604 bp Feature: domain Description: Phage_CI_repr Location: 103742 1-1037604 bp Feature: domain Description: Phage_CI_repr Location: 1037733-1037925 bp Feature: domain Description: Phage_CI_repr Location: 1037733-103792 5 bp Feature: domain Description: Phage_CI_C Location: 1037952-1038246 bp Feature: domain Description: Phage_CI_C Location: 1037952 -10382 46 bp Feature: gene Location: 1375928-1377067 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1376111-1377011 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1376111-1377011 bp Feature: gene Location: 1377238-1377480 bp Feature: domain Description: DinI Location: 1377289-1377469 bp Feature: domain Description: DinI Location: 13772 89-1377469 bp Feature: gene Location: 1378095-1379582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1378500-1379190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1378500-1379190 bp Feature: gene Location: 1379661-1380080 bp Feature: domain Description: PRK10276 Location: 1379664-1380075 bp Feature: domain Description: PRK102 76 Location: 1379664-1380075 bp Feature: gene Location: 1380083-1381348 bp Feature: domain Description: umuC Location: 1380086-1381346 bp Feature: domain Description: umuC Location: 1380086-1381346 bp Feature: gene Location: 1569704-1570408 bp Feature: domain Description: Rve Location: 1569710-1570352 bp Feature: domain Description: Rve Location: 1569710-1570352 bp Feature: gene Location: 1570474-1570923 bp Feature: domain Description: PinE Location: 1570483-1570915 bp Feature: domain Description: PinE Location: 1570483-1570915 bp Feature: gene Location: 1572318-1573805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1572723-1573413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1572 72 3-1573413 bp Feature: gene Location: 1573798-1574304 bp Feature: domain Description: PRK10276 Location: 1573888-1574299 bp Feature: domain Description: PRK102 76 Location: 1573888-15742 99 bp Feature: gene Location: 1574306-1575571 bp Feature: domain Description: umuC Location: 1574309-1575569 bp Feature: domain Description: umuC Location: 1574309-1575569 bp Feature: gene Location: 2912542-2913600 bp Feature: domain Description: YccC Location: 2912548-2913586 bp Feature: domain Description: YccC Location: 2 912 548-2 913586 bp Feature: gene Location: 2913699-2914172 bp Feature: domain Description: PRK10016 Location: 2913702-2914161 bp Feature: domain Description: PRK10016 Location: 2 913702 -2 914161 bp Feature: gene Location: 2914254-2915741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2914659-2915349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 914659-2 915349 bp Feature: gene Location: 2916259-2917422 bp Feature: domain Description: dacD Location: 2916262-2917417 bp Feature: domain Description: dacD Location: 2 9162 62 -2 917417 bp Feature: gene Location: 2917603-2919027 bp Feature: domain Description: SbcB Location: 2917609-2919025 bp Feature: domain Description: SbcB Location: 2 917609-2 91902 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)