myRT

myRT report for GCA_000694475.2_ASM69447v2

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Seq: JMYX02000002.1 Klebsiella pneumoniae MGH 59 scaffold00002, whole genome shotgun sequence (4816800 bp)
Overview 1 RT 1: 94905-98312 bp 2 RT 2: 537579-543184 bp 3 RT 3: 880142-885560 bp 4 RT 4: 1058859-1064724 bp 5 RT 5: 2302759-2309242 bp Neighborhood of RT #1 [94905, 98413] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [537579, 543210] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [880142, 885562] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1058859, 1064726] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2302759, 2309244] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 94905-95636 bp Feature: domain Description: Laminin_G_3 Location: 95226-95580 bp Feature: domain Description: Laminin_G_3 Location: 95226-95580 bp Feature: gene Location: 95633-95842 bp Feature: gene Location: 96295-97779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96697-97387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96697-97387 bp Feature: gene Location: 97857-98096 bp Feature: gene Location: 98096-98413 bp Feature: domain Description: PRK10276 Location: 98102-98216 bp Feature: domain Description: PRK1 0276 Location: 981 02-9821 6 bp Feature: domain Description: PRK10276 Location: 98243-98312 bp Feature: domain Description: PRK1 0276 Location: 98243-9831 2 bp Feature: gene Location: 537579-538142 bp Feature: domain Description: YbjK Location: 537585-538122 bp Feature: domain Description: YbjK Location: 537585-5381 22 bp Feature: gene Location: 538265-539317 bp Feature: domain Description: int Location: 538268-539267 bp Feature: domain Description: int Location: 538268-539267 bp Feature: gene Location: 539736-541220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 540138-540828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5401 38-540828 bp Feature: gene Location: 541319-542263 bp Feature: gene Location: 542275-543210 bp Feature: domain Description: Phage_CI_repr Location: 542359-542542 bp Feature: domain Description: Phage_CI_repr Location: 542359-542542 bp Feature: domain Description: Phage_CI_repr Location: 542671-542863 bp Feature: domain Description: Phage_CI_repr Location: 542671 -542863 bp Feature: domain Description: Phage_CI_C Location: 542890-543184 bp Feature: domain Description: Phage_CI_C Location: 542890-5431 84 bp Feature: gene Location: 880142-881281 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 880325-881225 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 880325-881 225 bp Feature: gene Location: 881452-881694 bp Feature: domain Description: DinI Location: 881503-881683 bp Feature: domain Description: DinI Location: 881 503-881 683 bp Feature: gene Location: 882312-883796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 882714-883404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88271 4-883404 bp Feature: gene Location: 883875-884294 bp Feature: domain Description: PRK10276 Location: 883878-884289 bp Feature: domain Description: PRK1 0276 Location: 883878-884289 bp Feature: gene Location: 884297-885562 bp Feature: domain Description: umuC Location: 884300-885560 bp Feature: domain Description: umuC Location: 884300-885560 bp Feature: gene Location: 1058859-1059563 bp Feature: domain Description: Rve Location: 1058862-1059507 bp Feature: domain Description: Rve Location: 1 058862-1 059507 bp Feature: gene Location: 1059629-1060078 bp Feature: domain Description: PinE Location: 1059638-1060070 bp Feature: domain Description: PinE Location: 1 059638-1 060070 bp Feature: gene Location: 1061476-1062960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1061878-1062568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 061 878-1 062568 bp Feature: gene Location: 1062953-1063459 bp Feature: domain Description: PRK10276 Location: 1063043-1063454 bp Feature: domain Description: PRK1 0276 Location: 1 063043-1 063454 bp Feature: gene Location: 1063461-1064726 bp Feature: domain Description: umuC Location: 1063464-1064724 bp Feature: domain Description: umuC Location: 1 063464-1 064724 bp Feature: gene Location: 2302759-2303817 bp Feature: domain Description: YccC Location: 2302765-2303803 bp Feature: domain Description: YccC Location: 2302765-2303803 bp Feature: gene Location: 2303916-2304389 bp Feature: domain Description: PRK10016 Location: 2303919-2304378 bp Feature: domain Description: PRK1 001 6 Location: 230391 9-2304378 bp Feature: gene Location: 2304471-2305955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2304873-2305563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2304873-2305563 bp Feature: gene Location: 2306476-2307639 bp Feature: domain Description: dacD Location: 2306479-2307634 bp Feature: domain Description: dacD Location: 2306479-2307634 bp Feature: gene Location: 2307820-2309244 bp Feature: domain Description: SbcB Location: 2307826-2309242 bp Feature: domain Description: SbcB Location: 2307826-2309242 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: JMYX02000003.1 Klebsiella pneumoniae MGH 59 scaffold00003, whole genome shotgun sequence (90957 bp)
Overview 1 RT 1: 76403-80837 bp Neighborhood of RT #1 [76403, 80842] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 76403-76594 bp Feature: gene Location: 76910-77440 bp Feature: gene Location: 78015-79916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78282-79113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 782 82 -79113 bp Feature: domain Description: Intron_maturas2 Location: 79227-79485 bp Feature: domain Description: Intron_maturas2 Location: 792 2 7-79485 bp Feature: domain Description: HNHc Note: nucleases Location: 79659-79821 bp Feature: domain Description: HNHc Note: nucleases Location: 79659-7982 1 bp Feature: gene Location: 80111-80551 bp Feature: domain Description: PRK13732 Location: 80114-80549 bp Feature: domain Description: PRK13732 Location: 80114-80549 bp Feature: gene Location: 80609-80842 bp Feature: domain Description: DUF905 Location: 80639-80837 bp Feature: domain Description: DUF905 Location: 80639-80837 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)

Seq: JMYX02000005.1 Klebsiella pneumoniae MGH 59 scaffold00005, whole genome shotgun sequence (151208 bp)
Overview 1 RT 1: 112831-117820 bp Neighborhood of RT #1 [112831, 117825] AdoMet_MTases RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 112831-113394 bp Feature: domain Description: AdoMet_MTases Location: 112993-113293 bp Feature: domain Description: AdoMet_MTases Location: 112993 -113 293 bp Feature: gene Location: 113420-113686 bp Feature: gene Location: 114981-116882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115248-116079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115248-116079 bp Feature: domain Description: Intron_maturas2 Location: 116193-116451 bp Feature: domain Description: Intron_maturas2 Location: 116193 -116451 bp Feature: domain Description: HNHc Note: nucleases Location: 116625-116787 bp Feature: domain Description: HNHc Note: nucleases Location: 116625-116787 bp Feature: gene Location: 117077-117529 bp Feature: domain Description: PRK13732 Location: 117080-117527 bp Feature: domain Description: PRK13 73 2 Location: 117080-117527 bp Feature: gene Location: 117592-117825 bp Feature: domain Description: DUF905 Location: 117622-117820 bp Feature: domain Description: DUF905 Location: 117622-117820 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AdoMet_MTases (cl17173), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)