myRT

myRT report for GCA_000694535.1_Kleb_pneu_MGH_65_V1

Download annotations/find similar RTs

Seq: KK737535.1 (1711767 bp)
Overview 1 RT 1: 883372-891957 bp Neighborhood of RT #1 [883372, 891974] YqgA PRK09692 RVT-UG4 FimD FimC Feature: gene Location: 883372-884052 bp Ori: KDL43760.1 Feature: domain Description: YqgA Location: 883375-884047 bp Feature: domain Description: YqgA Location: 883375-884047 bp Feature: gene Location: 884870-885733 bp Ori: KDL43761.1 Feature: domain Description: PRK09692 Location: 884894-885731 bp Feature: domain Description: PRK09692 Location: 884894-885731 bp Feature: gene Location: 886491-888572 bp Ori: KDL43762.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 886902-887346 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 886902-887346 bp Feature: gene Location: 888569-891163 bp Ori: KDL43763.1 Feature: domain Description: FimD Location: 888611-891152 bp Feature: domain Description: FimD Location: 88861 1 -891 1 52 bp Feature: gene Location: 891210-891974 bp Ori: KDL43764.1 Feature: domain Description: FimC Location: 891255-891957 bp Feature: domain Description: FimC Location: 891 255-891 957 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YqgA (COG1811), PRK09692 (Integrase; provisional), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: KK737537.1 (303752 bp)
Overview 1 RT 1: 288039-293051 bp Neighborhood of RT #1 [288039, 293051] INT_Cre_C RVT-GII HHA Feature: gene Location: 288039-288356 bp Feature: gene Location: 288422-289558 bp Ori: KDL40777.1 Feature: domain Description: INT_Cre_C Location: 288845-289499 bp Feature: domain Description: INT_Cre_C Location: 2 88845-2 89499 bp Feature: gene Location: 289644-291128 bp Ori: KDL40778.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 290046-290736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 90046-2 90736 bp Feature: gene Location: 291644-291898 bp Ori: KDL40779.1 Feature: domain Description: HHA Location: 291695-291878 bp Feature: domain Description: HHA Location: 2 91695-2 91878 bp Feature: gene Location: 291984-293051 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Cre_C (cd00799), RVT-GII, HHA (pfam05321)

Seq: KK737534.1 (3073865 bp)
Overview 1 RT 1: 1152461-1157878 bp 2 RT 2: 2436086-2440176 bp Neighborhood of RT #1 [1152461, 1157880] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #2 [2436086, 2440176] RVT-GII Feature: gene Location: 1152461-1153600 bp Ori: KDL48111.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1152644-1153544 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1152644-1153 544 bp Feature: gene Location: 1153771-1154013 bp Ori: KDL48112.1 Feature: domain Description: DinI Location: 1153822-1154002 bp Feature: domain Description: DinI Location: 1153 822-1154002 bp Feature: gene Location: 1154630-1156114 bp Ori: KDL48113.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1155032-1155722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115503 2-1155722 bp Feature: gene Location: 1156193-1156612 bp Ori: KDL48114.1 Feature: domain Description: PRK10276 Location: 1156196-1156607 bp Feature: domain Description: PRK10276 Location: 1156196-1156607 bp Feature: gene Location: 1156615-1157880 bp Ori: KDL48115.1 Feature: domain Description: umuC Location: 1156618-1157878 bp Feature: domain Description: umuC Location: 1156618-1157878 bp Feature: gene Location: 2436086-2436961 bp Feature: gene Location: 2436994-2437098 bp Feature: gene Location: 2437176-2438660 bp Ori: KDL46586.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2437578-2438268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 243 7578-243 8268 bp Feature: gene Location: 2439240-2439413 bp Feature: gene Location: 2439424-2440176 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)