myRT

myRT report for GCA_000694575.1_Kleb_pneu_MGH_67_V1

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Seq: KK737555.1 Klebsiella pneumoniae MGH-67 genomic scaffold aedYG-supercont1.4, whole genome shotgun sequence (550699 bp)
Overview 1 RT 1: 1-4550 bp Neighborhood of RT #1 [1, 4552] RVT-GII dacD SbcB Feature: gene Location: 1-1266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 406-1096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 406-1 096 bp Feature: gene Location: 1784-2947 bp Feature: domain Description: dacD Location: 1787-2942 bp Feature: domain Description: dacD Location: 1 787-2942 bp Feature: gene Location: 3128-4552 bp Feature: domain Description: SbcB Location: 3134-4550 bp Feature: domain Description: SbcB Location: 31 34-4550 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KK737553.1 Klebsiella pneumoniae MGH-67 genomic scaffold aedYG-supercont1.2, whole genome shotgun sequence (891503 bp)
Overview 1 RT 1: 887936-890743 bp Neighborhood of RT #1 [887936, 891135] YccC PRK10016 RVT-GII Feature: gene Location: 887936-888994 bp Feature: domain Description: YccC Location: 887942-888980 bp Feature: domain Description: YccC Location: 887942 -888980 bp Feature: gene Location: 889093-889566 bp Feature: domain Description: PRK10016 Location: 889096-889555 bp Feature: domain Description: PRK10016 Location: 889096-889555 bp Feature: gene Location: 889648-891135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 890053-890743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 890053-890743 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII

Seq: KK737569.1 Klebsiella pneumoniae MGH-67 genomic scaffold aedYG-supercont1.18, whole genome shotgun sequence (15503 bp)
Overview 1 RT 1: 1-4724 bp Neighborhood of RT #1 [1, 4729] RVT-GII PRK10276 umuC Feature: gene Location: 1-158 bp Feature: gene Location: 679-909 bp Feature: gene Location: 1143-2630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1548-2238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1548-223 8 bp Feature: gene Location: 3033-3458 bp Feature: domain Description: PRK10276 Location: 3036-3444 bp Feature: domain Description: PRK10276 Location: 3 03 6-3 444 bp Feature: gene Location: 3458-4729 bp Feature: domain Description: umuC Location: 3461-4724 bp Feature: domain Description: umuC Location: 3 461-4724 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, umuC (PRK03609)

Seq: KK737552.1 Klebsiella pneumoniae MGH-67 genomic scaffold aedYG-supercont1.1, whole genome shotgun sequence (1212586 bp)
Overview 1 RT 1: 327497-330904 bp 2 RT 2: 768844-774449 bp 3 RT 3: 1111346-1116764 bp Neighborhood of RT #1 [327497, 331005] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [768844, 774475] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1111346, 1116766] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 327497-328228 bp Feature: domain Description: Laminin_G_3 Location: 327818-328172 bp Feature: domain Description: Laminin_G_3 Location: 327818-328172 bp Feature: gene Location: 328225-328434 bp Feature: gene Location: 328884-330371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329289-329979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329289-329979 bp Feature: gene Location: 330449-330688 bp Feature: gene Location: 330688-331005 bp Feature: domain Description: PRK10276 Location: 330694-330808 bp Feature: domain Description: PRK10276 Location: 330694 -330808 bp Feature: domain Description: PRK10276 Location: 330835-330904 bp Feature: domain Description: PRK10276 Location: 330835-330904 bp Feature: gene Location: 768844-769407 bp Feature: domain Description: YbjK Location: 768850-769387 bp Feature: domain Description: YbjK Location: 768850-769387 bp Feature: gene Location: 769530-770582 bp Feature: domain Description: int Location: 769533-770532 bp Feature: domain Description: int Location: 769533-770532 bp Feature: gene Location: 770998-772485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 771403-772093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7714 03-772093 bp Feature: gene Location: 772584-773528 bp Feature: gene Location: 773540-774475 bp Feature: domain Description: Phage_CI_repr Location: 773624-773807 bp Feature: domain Description: Phage_CI_repr Location: 773624 -773807 bp Feature: domain Description: Phage_CI_repr Location: 773936-774128 bp Feature: domain Description: Phage_CI_repr Location: 773936-774 128 bp Feature: domain Description: Phage_CI_C Location: 774155-774449 bp Feature: domain Description: Phage_CI_C Location: 774 155-774 4 4 9 bp Feature: gene Location: 1111346-1112485 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1111529-1112429 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1111529-11124 29 bp Feature: gene Location: 1112656-1112898 bp Feature: domain Description: DinI Location: 1112707-1112887 bp Feature: domain Description: DinI Location: 1112707-1112887 bp Feature: gene Location: 1113513-1115000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1113918-1114608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1113918-1114 608 bp Feature: gene Location: 1115079-1115498 bp Feature: domain Description: PRK10276 Location: 1115082-1115493 bp Feature: domain Description: PRK10276 Location: 1115082-11154 93 bp Feature: gene Location: 1115501-1116766 bp Feature: domain Description: umuC Location: 1115504-1116764 bp Feature: domain Description: umuC Location: 1115504 -1116764 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)