myRT

myRT report for GCA_000694615.1_Kleb_pneu_MGH_69_V1

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Seq: KK737591.1 (147228 bp)
Overview 1 RT 1: 22781-27775 bp Neighborhood of RT #1 [22781, 27777] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 22781-24052 bp Feature: domain Description: umuC Location: 22784-24047 bp Feature: domain Description: umuC Location: 22784-24047 bp Feature: gene Location: 24052-24477 bp Feature: domain Description: PRK10276 Location: 24055-24463 bp Feature: domain Description: PRK1 0276 Location: 24055-24463 bp Feature: gene Location: 24883-26367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25285-25975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25285-25975 bp Feature: gene Location: 26601-26831 bp Feature: gene Location: 27352-27777 bp Feature: domain Description: Antirestrict Location: 27487-27775 bp Feature: domain Description: Antirestrict Location: 27487-27775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KK737589.1 (3839600 bp)
Overview 1 RT 1: 1275387-1280791 bp 2 RT 2: 1314269-1319634 bp Neighborhood of RT #1 [1275387, 1280793] PRK10016 RVT-GII dacD SbcB Neighborhood of RT #2 [1314269, 1319636] NolL RVT-GII GT4_MtfB-like PRK10124 Feature: gene Location: 1275387-1275860 bp Feature: domain Description: PRK10016 Location: 1275390-1275849 bp Feature: domain Description: PRK10016 Location: 12 75390-12 75849 bp Feature: gene Location: 1276221-1276637 bp Feature: gene Location: 1276901-1277504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1277303-1277489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 77303-12 77489 bp Feature: gene Location: 1278025-1279188 bp Feature: domain Description: dacD Location: 1278028-1279183 bp Feature: domain Description: dacD Location: 12 7802 8-12 79183 bp Feature: gene Location: 1279369-1280793 bp Feature: domain Description: SbcB Location: 1279375-1280791 bp Feature: domain Description: SbcB Location: 12 79375-12 80791 bp Feature: gene Location: 1314269-1314451 bp Feature: gene Location: 1314672-1315268 bp Feature: domain Description: NolL Location: 1314675-1315191 bp Feature: domain Description: NolL Location: 1314675-1315191 bp Feature: gene Location: 1315373-1316857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1315775-1316465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1315775-1316465 bp Feature: gene Location: 1317230-1318222 bp Feature: domain Description: GT4_MtfB-like Location: 1317389-1318190 bp Feature: domain Description: GT4_MtfB-like Location: 1317389-1318190 bp Feature: gene Location: 1318239-1319636 bp Feature: domain Description: PRK10124 Location: 1318251-1319634 bp Feature: domain Description: PRK1012 4 Location: 13182 51-1319634 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925), NolL (COG3594), GT4_MtfB-like (cd03809), PRK10124 (putative UDP-glucose lipid carrier transferase; Provisional)

Seq: KK737590.1 (1522444 bp)
Overview 1 RT 1: 988310-993915 bp 2 RT 2: 1331545-1336963 bp Neighborhood of RT #1 [988310, 993941] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [1331545, 1336965] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 988310-988873 bp Feature: domain Description: YbjK Location: 988316-988853 bp Feature: domain Description: YbjK Location: 9883 16-988853 bp Feature: gene Location: 988996-990048 bp Feature: domain Description: int Location: 988999-989998 bp Feature: domain Description: int Location: 988999-989998 bp Feature: gene Location: 990467-991951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 990869-991559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 990869-991559 bp Feature: gene Location: 992050-992994 bp Feature: gene Location: 993006-993941 bp Feature: domain Description: Phage_CI_repr Location: 993090-993273 bp Feature: domain Description: Phage_CI_repr Location: 993 090-993 273 bp Feature: domain Description: Phage_CI_repr Location: 993402-993594 bp Feature: domain Description: Phage_CI_repr Location: 993 402-993 594 bp Feature: domain Description: Phage_CI_C Location: 993621-993915 bp Feature: domain Description: Phage_CI_C Location: 993 621-993 915 bp Feature: gene Location: 1331545-1332684 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1331728-1332628 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 13 3 1728-13 3 2628 bp Feature: gene Location: 1332855-1333097 bp Feature: domain Description: DinI Location: 1332906-1333086 bp Feature: domain Description: DinI Location: 13 3 2906-13 3 3 086 bp Feature: gene Location: 1333715-1335199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1334117-1334807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 3 4117-13 3 4807 bp Feature: gene Location: 1335278-1335697 bp Feature: domain Description: PRK10276 Location: 1335281-1335692 bp Feature: domain Description: PRK10276 Location: 13 3 5281-13 3 5692 bp Feature: gene Location: 1335700-1336965 bp Feature: domain Description: umuC Location: 1335703-1336963 bp Feature: domain Description: umuC Location: 13 3 5703 -13 3 6963 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)