myRT

myRT report for GCA_000694695.1_Kleb_pneu_MGH_73_V1

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Seq: KK737637.1 Klebsiella pneumoniae MGH-73 genomic scaffold aedYN-supercont1.2, whole genome shotgun sequence (1439429 bp)
Overview 1 RT 1: 601814-605221 bp 2 RT 2: 946432-952037 bp 3 RT 3: 1288933-1294351 bp Neighborhood of RT #1 [601814, 605322] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [946432, 952063] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1288933, 1294353] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 601814-602545 bp Feature: domain Description: Laminin_G_3 Location: 602135-602489 bp Feature: domain Description: Laminin_G_3 Location: 6021 35-602489 bp Feature: gene Location: 602542-602751 bp Feature: gene Location: 603204-604688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 603606-604296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 603606-604296 bp Feature: gene Location: 604766-605005 bp Feature: gene Location: 605005-605322 bp Feature: domain Description: PRK10276 Location: 605011-605125 bp Feature: domain Description: PRK1 0276 Location: 60501 1 -6051 25 bp Feature: domain Description: PRK10276 Location: 605152-605221 bp Feature: domain Description: PRK1 0276 Location: 6051 52-605221 bp Feature: gene Location: 946432-946995 bp Feature: domain Description: YbjK Location: 946438-946975 bp Feature: domain Description: YbjK Location: 946438-946975 bp Feature: gene Location: 947118-948170 bp Feature: domain Description: int Location: 947121-948120 bp Feature: domain Description: int Location: 9471 21 -9481 20 bp Feature: gene Location: 948589-950073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 948991-949681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 948991 -949681 bp Feature: gene Location: 950172-951116 bp Feature: gene Location: 951128-952063 bp Feature: domain Description: Phage_CI_repr Location: 951212-951395 bp Feature: domain Description: Phage_CI_repr Location: 951 21 2-951 395 bp Feature: domain Description: Phage_CI_repr Location: 951524-951716 bp Feature: domain Description: Phage_CI_repr Location: 951 524-951 71 6 bp Feature: domain Description: Phage_CI_C Location: 951743-952037 bp Feature: domain Description: Phage_CI_C Location: 951 743-952037 bp Feature: gene Location: 1288933-1290072 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1289116-1290016 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 2891 1 6-1 29001 6 bp Feature: gene Location: 1290243-1290485 bp Feature: domain Description: DinI Location: 1290294-1290474 bp Feature: domain Description: DinI Location: 1 290294-1 290474 bp Feature: gene Location: 1291103-1292587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1291505-1292195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 291 505-1 2921 95 bp Feature: gene Location: 1292666-1293085 bp Feature: domain Description: PRK10276 Location: 1292669-1293080 bp Feature: domain Description: PRK1 0276 Location: 1 292669-1 293080 bp Feature: gene Location: 1293088-1294353 bp Feature: domain Description: umuC Location: 1293091-1294351 bp Feature: domain Description: umuC Location: 1 293091 -1 294351 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)

Seq: KK737636.1 Klebsiella pneumoniae MGH-73 genomic scaffold aedYN-supercont1.1, whole genome shotgun sequence (3279219 bp)
Overview 1 RT 1: 1167796-1174279 bp 2 RT 2: 1780938-1786599 bp Neighborhood of RT #1 [1167796, 1174281] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #2 [1780938, 1786676] DinI RVT-GII Phage_GPA dam Feature: gene Location: 1167796-1168854 bp Feature: domain Description: YccC Location: 1167802-1168840 bp Feature: domain Description: YccC Location: 1167802 -1168840 bp Feature: gene Location: 1168953-1169426 bp Feature: domain Description: PRK10016 Location: 1168956-1169415 bp Feature: domain Description: PRK10016 Location: 1168956-1169415 bp Feature: gene Location: 1169508-1170992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1169910-1170600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1169910-1170600 bp Feature: gene Location: 1171513-1172676 bp Feature: domain Description: dacD Location: 1171516-1172671 bp Feature: domain Description: dacD Location: 1171516-1172 671 bp Feature: gene Location: 1172857-1174281 bp Feature: domain Description: SbcB Location: 1172863-1174279 bp Feature: domain Description: SbcB Location: 1172 863-11742 79 bp Feature: gene Location: 1780938-1781171 bp Feature: domain Description: DinI Location: 1780983-1781166 bp Feature: domain Description: DinI Location: 1780983-1781166 bp Feature: gene Location: 1781183-1781371 bp Feature: gene Location: 1781479-1782963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1781881-1782571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1781881-1782 571 bp Feature: gene Location: 1783444-1785828 bp Feature: domain Description: Phage_GPA Location: 1784008-1784974 bp Feature: domain Description: Phage_GPA Location: 1784008-1784974 bp Feature: gene Location: 1785825-1786676 bp Feature: domain Description: dam Location: 1785828-1786599 bp Feature: domain Description: dam Location: 178582 8-1786599 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925), DinI (pfam06183), Phage_GPA (pfam05840), dam (TIGR00571)