myRT

myRT report for GCA_000694715.1_Kleb_pneu_MGH_74_V1

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Seq: KK737645.1 Klebsiella pneumoniae MGH-74 genomic scaffold aeear-supercont1.4, whole genome shotgun sequence (160591 bp)
Overview 1 RT 1: 18974-23980 bp Neighborhood of RT #1 [18974, 23980] INT_Cre_C RVT-GII HHA Feature: gene Location: 18974-19291 bp Feature: gene Location: 19357-20493 bp Feature: domain Description: INT_Cre_C Location: 19780-20434 bp Feature: domain Description: INT_Cre_C Location: 1 9780-20434 bp Feature: gene Location: 20579-22066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20984-21674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20984-21 674 bp Feature: gene Location: 22579-22833 bp Feature: domain Description: HHA Location: 22630-22813 bp Feature: domain Description: HHA Location: 22630-2281 3 bp Feature: gene Location: 22919-23980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Cre_C (cd00799), RVT-GII, HHA (pfam05321)

Seq: KK737642.1 Klebsiella pneumoniae MGH-74 genomic scaffold aeear-supercont1.1, whole genome shotgun sequence (4227848 bp)
Overview 1 RT 1: 1122512-1127929 bp 2 RT 2: 1827054-1831707 bp 3 RT 3: 2379620-2386102 bp Neighborhood of RT #1 [1122512, 1127931] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #2 [1827054, 1831709] ALDH_SaliADH MhpC RVT-GII Toxin_GhoT_OrtT YncL Neighborhood of RT #3 [2379620, 2386104] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 1122512-1123651 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1122695-1123595 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 112 2 695-112 3595 bp Feature: gene Location: 1123822-1124064 bp Feature: domain Description: DinI Location: 1123873-1124053 bp Feature: domain Description: DinI Location: 112 3873-112 4053 bp Feature: gene Location: 1124678-1126165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1125083-1125773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112 5083-112 5773 bp Feature: gene Location: 1126244-1126663 bp Feature: domain Description: PRK10276 Location: 1126247-1126658 bp Feature: domain Description: PRK102 76 Location: 112 62 47-112 6658 bp Feature: gene Location: 1126666-1127931 bp Feature: domain Description: umuC Location: 1126669-1127929 bp Feature: domain Description: umuC Location: 112 6669-112 792 9 bp Feature: gene Location: 1827054-1828487 bp Feature: domain Description: ALDH_SaliADH Location: 1827189-1828458 bp Feature: domain Description: ALDH_SaliADH Location: 182 7189-182 8458 bp Feature: gene Location: 1828501-1829250 bp Feature: domain Description: MhpC Location: 1828513-1829242 bp Feature: domain Description: MhpC Location: 182 8513-182 92 42 bp Feature: gene Location: 1829332-1830819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1829737-1830427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 182 9737-183042 7 bp Feature: gene Location: 1831248-1831421 bp Feature: domain Description: Toxin_GhoT_OrtT Location: 1831260-1831419 bp Feature: domain Description: Toxin_GhoT_OrtT Location: 18312 60-1831419 bp Feature: gene Location: 1831617-1831709 bp Feature: domain Description: YncL Location: 1831620-1831707 bp Feature: domain Description: YncL Location: 183162 0-1831707 bp Feature: gene Location: 2379620-2380678 bp Feature: domain Description: YccC Location: 2379626-2380664 bp Feature: domain Description: YccC Location: 2 37962 6-2 380664 bp Feature: gene Location: 2380777-2381250 bp Feature: domain Description: PRK10016 Location: 2380780-2381239 bp Feature: domain Description: PRK10016 Location: 2 380780-2 3812 39 bp Feature: gene Location: 2381332-2382819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2381737-2382427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 381737-2 382 42 7 bp Feature: gene Location: 2383336-2384499 bp Feature: domain Description: dacD Location: 2383339-2384494 bp Feature: domain Description: dacD Location: 2 383339-2 384494 bp Feature: gene Location: 2384680-2386104 bp Feature: domain Description: SbcB Location: 2384686-2386102 bp Feature: domain Description: SbcB Location: 2 384686-2 386102 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), ALDH_SaliADH (cd07105), MhpC (COG0596), Toxin_GhoT_OrtT (pfam10753), YncL (NF000537), YccC (COG1289)
PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KK737649.1 Klebsiella pneumoniae MGH-74 genomic scaffold aeear-supercont1.8, whole genome shotgun sequence (59635 bp)
Overview 1 RT 1: 42664-48016 bp Neighborhood of RT #1 [42664, 48153] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 42664-43935 bp Feature: domain Description: umuC Location: 42667-43927 bp Feature: domain Description: umuC Location: 42667-43 927 bp Feature: gene Location: 43935-44366 bp Feature: domain Description: PRK10276 Location: 43986-44349 bp Feature: domain Description: PRK10276 Location: 43 986-443 49 bp Feature: gene Location: 44772-46259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45177-45867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45177-45867 bp Feature: gene Location: 46508-47479 bp Feature: domain Description: StbA Location: 46511-47456 bp Feature: domain Description: StbA Location: 46511-47456 bp Feature: gene Location: 47482-48153 bp Feature: domain Description: Plasmid_stab_B Location: 47497-47704 bp Feature: domain Description: Plasmid_stab_B Location: 47497-47704 bp Feature: domain Description: Plasmid_stab_B Location: 47809-48016 bp Feature: domain Description: Plasmid_stab_B Location: 47809-48016 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)