myRT

myRT report for GCA_000694795.1_Kleb_pneu_UCI_55_V1

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Seq: KK737696.1 Klebsiella pneumoniae UCI 55 genomic scaffold aeeaq-supercont1.1, whole genome shotgun sequence (5462987 bp)
Overview 1 RT 1: 583985-587392 bp 2 RT 2: 1026534-1032139 bp 3 RT 3: 1369780-1375198 bp 4 RT 4: 2883677-2890160 bp 5 RT 5: 3334395-3337876 bp Neighborhood of RT #1 [583985, 587493] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026534, 1032165] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369780, 1375200] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2883677, 2890162] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #5 [3334395, 3337876] Terminase_2 RVT-GII Feature: gene Location: 583985-584716 bp Feature: domain Description: Laminin_G_3 Location: 584306-584660 bp Feature: domain Description: Laminin_G_3 Location: 584306-584660 bp Feature: gene Location: 584713-584922 bp Feature: gene Location: 585375-586859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585777-586467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585777-586467 bp Feature: gene Location: 586937-587176 bp Feature: gene Location: 587176-587493 bp Feature: domain Description: PRK10276 Location: 587182-587296 bp Feature: domain Description: PRK1 0276 Location: 5871 82-587296 bp Feature: domain Description: PRK10276 Location: 587323-587392 bp Feature: domain Description: PRK1 0276 Location: 587323-587392 bp Feature: gene Location: 1026534-1027097 bp Feature: domain Description: YbjK Location: 1026540-1027077 bp Feature: domain Description: YbjK Location: 1 026540-1 027077 bp Feature: gene Location: 1027220-1028272 bp Feature: domain Description: int Location: 1027223-1028222 bp Feature: domain Description: int Location: 1 027223-1 028222 bp Feature: gene Location: 1028691-1030175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029093-1029783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 029093-1 029783 bp Feature: gene Location: 1030274-1031218 bp Feature: gene Location: 1031230-1032165 bp Feature: domain Description: Phage_CI_repr Location: 1031314-1031497 bp Feature: domain Description: Phage_CI_repr Location: 1 031 31 4-1 031 497 bp Feature: domain Description: Phage_CI_repr Location: 1031626-1031818 bp Feature: domain Description: Phage_CI_repr Location: 1 031 626-1 031 81 8 bp Feature: domain Description: Phage_CI_C Location: 1031845-1032139 bp Feature: domain Description: Phage_CI_C Location: 1 031 845-1 0321 39 bp Feature: gene Location: 1369780-1370919 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369963-1370863 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 369963-1 370863 bp Feature: gene Location: 1371090-1371332 bp Feature: domain Description: DinI Location: 1371141-1371321 bp Feature: domain Description: DinI Location: 1 371 1 41 -1 371 321 bp Feature: gene Location: 1371950-1373434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372352-1373042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 372352-1 373042 bp Feature: gene Location: 1373513-1373932 bp Feature: domain Description: PRK10276 Location: 1373516-1373927 bp Feature: domain Description: PRK1 0276 Location: 1 37351 6-1 373927 bp Feature: gene Location: 1373935-1375200 bp Feature: domain Description: umuC Location: 1373938-1375198 bp Feature: domain Description: umuC Location: 1 373938-1 3751 98 bp Feature: gene Location: 2883677-2884735 bp Feature: domain Description: YccC Location: 2883683-2884721 bp Feature: domain Description: YccC Location: 2883683-2884721 bp Feature: gene Location: 2884834-2885307 bp Feature: domain Description: PRK10016 Location: 2884837-2885296 bp Feature: domain Description: PRK1 001 6 Location: 2884837-2885296 bp Feature: gene Location: 2885389-2886873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2885791-2886481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2885791 -2886481 bp Feature: gene Location: 2887394-2888557 bp Feature: domain Description: dacD Location: 2887397-2888552 bp Feature: domain Description: dacD Location: 2887397-2888552 bp Feature: gene Location: 2888738-2890162 bp Feature: domain Description: SbcB Location: 2888744-2890160 bp Feature: domain Description: SbcB Location: 2888744-28901 60 bp Feature: gene Location: 3334395-3334979 bp Feature: domain Description: Terminase_2 Location: 3334440-3334905 bp Feature: domain Description: Terminase_2 Location: 3334440-3334905 bp Feature: gene Location: 3335057-3335314 bp Feature: gene Location: 3335718-3337202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3336120-3336810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33361 20-333681 0 bp Feature: gene Location: 3337299-3337637 bp Feature: gene Location: 3337637-3337876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925), Terminase_2 (pfam03592)