myRT

myRT report for GCA_000694915.1_Kleb_pneu_UCI_67_V1

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Seq: KK737764.1 Klebsiella pneumoniae UCI 67 genomic scaffold aedZN-supercont1.11, whole genome shotgun sequence (7337 bp)
Overview 1 RT 1: 3851-7045 bp Neighborhood of RT #1 [3851, 7337] umuC PRK10276 RVT-GII Feature: gene Location: 3851-5122 bp Feature: domain Description: umuC Location: 3854-5117 bp Feature: domain Description: umuC Location: 3854-51 1 7 bp Feature: gene Location: 5122-5547 bp Feature: domain Description: PRK10276 Location: 5125-5533 bp Feature: domain Description: PRK1 0276 Location: 51 25-5533 bp Feature: gene Location: 5950-7337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6355-7045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6355-7045 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: KK737757.1 Klebsiella pneumoniae UCI 67 genomic scaffold aedZN-supercont1.4, whole genome shotgun sequence (91349 bp)
Overview 1 RT 1: 17211-21651 bp Neighborhood of RT #1 [17211, 21651] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 17211-17444 bp Feature: domain Description: DUF905 Location: 17241-17439 bp Feature: domain Description: DUF905 Location: 172 41-17439 bp Feature: gene Location: 17502-17942 bp Feature: domain Description: PRK13732 Location: 17505-17940 bp Feature: domain Description: PRK13732 Location: 17505-17940 bp Feature: gene Location: 18137-20038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18404-19235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18404-192 35 bp Feature: domain Description: Intron_maturas2 Location: 19349-19607 bp Feature: domain Description: Intron_maturas2 Location: 19349-19607 bp Feature: domain Description: HNHc Note: nucleases Location: 19781-19943 bp Feature: domain Description: HNHc Note: nucleases Location: 19781-19943 bp Feature: gene Location: 20613-21143 bp Feature: gene Location: 21460-21651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: KK737754.1 Klebsiella pneumoniae UCI 67 genomic scaffold aedZN-supercont1.1, whole genome shotgun sequence (3282568 bp)
Overview 1 RT 1: 582155-585562 bp 2 RT 2: 1023504-1029109 bp 3 RT 3: 1366370-1371788 bp 4 RT 4: 2726366-2732849 bp Neighborhood of RT #1 [582155, 585663] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1023504, 1029135] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1366370, 1371790] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2726366, 2732851] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 582155-582886 bp Feature: domain Description: Laminin_G_3 Location: 582476-582830 bp Feature: domain Description: Laminin_G_3 Location: 582476-58283 0 bp Feature: gene Location: 582883-583092 bp Feature: gene Location: 583542-585029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 583947-584637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 583 947-58463 7 bp Feature: gene Location: 585107-585346 bp Feature: gene Location: 585346-585663 bp Feature: domain Description: PRK10276 Location: 585352-585466 bp Feature: domain Description: PRK10276 Location: 5853 52-585466 bp Feature: domain Description: PRK10276 Location: 585493-585562 bp Feature: domain Description: PRK10276 Location: 585493 -585562 bp Feature: gene Location: 1023504-1024067 bp Feature: domain Description: YbjK Location: 1023510-1024047 bp Feature: domain Description: YbjK Location: 1023 510-1024047 bp Feature: gene Location: 1024190-1025242 bp Feature: domain Description: int Location: 1024193-1025192 bp Feature: domain Description: int Location: 1024193 -1025192 bp Feature: gene Location: 1025658-1027145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1026063-1026753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1026063 -1026753 bp Feature: gene Location: 1027244-1028188 bp Feature: gene Location: 1028200-1029135 bp Feature: domain Description: Phage_CI_repr Location: 1028284-1028467 bp Feature: domain Description: Phage_CI_repr Location: 1028284-1028467 bp Feature: domain Description: Phage_CI_repr Location: 1028596-1028788 bp Feature: domain Description: Phage_CI_repr Location: 1028596-1028788 bp Feature: domain Description: Phage_CI_C Location: 1028815-1029109 bp Feature: domain Description: Phage_CI_C Location: 1028815-1029109 bp Feature: gene Location: 1366370-1367509 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1366553-1367453 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 13 66553 -13 67453 bp Feature: gene Location: 1367680-1367922 bp Feature: domain Description: DinI Location: 1367731-1367911 bp Feature: domain Description: DinI Location: 13 6773 1-13 67911 bp Feature: gene Location: 1368537-1370024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1368942-1369632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 68942-13 6963 2 bp Feature: gene Location: 1370103-1370522 bp Feature: domain Description: PRK10276 Location: 1370106-1370517 bp Feature: domain Description: PRK10276 Location: 13 70106-13 70517 bp Feature: gene Location: 1370525-1371790 bp Feature: domain Description: umuC Location: 1370528-1371788 bp Feature: domain Description: umuC Location: 13 70528-13 71788 bp Feature: gene Location: 2726366-2727424 bp Feature: domain Description: YccC Location: 2726372-2727410 bp Feature: domain Description: YccC Location: 27263 72-2727410 bp Feature: gene Location: 2727523-2727996 bp Feature: domain Description: PRK10016 Location: 2727526-2727985 bp Feature: domain Description: PRK10016 Location: 2727526-2727985 bp Feature: gene Location: 2728078-2729565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2728483-2729173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2728483 -2729173 bp Feature: gene Location: 2730083-2731246 bp Feature: domain Description: dacD Location: 2730086-2731241 bp Feature: domain Description: dacD Location: 273 0086-273 1241 bp Feature: gene Location: 2731427-2732851 bp Feature: domain Description: SbcB Location: 2731433-2732849 bp Feature: domain Description: SbcB Location: 273 143 3 -273 2849 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)