myRT

myRT report for GCA_000695285.2_SaK60

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Seq: AYOV01000034.1 (68218 bp)
Overview 1 RT 1: 3-3620 bp Neighborhood of RT #1 [3, 3622] RVT-GII PRK10276 umuC Feature: gene Location: 3-215 bp Feature: gene Location: 369-1856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1 464 bp Feature: gene Location: 1936-2355 bp Feature: domain Description: PRK10276 Location: 1939-2350 bp Feature: domain Description: PRK1 0276 Location: 1 939-2350 bp Feature: gene Location: 2357-3622 bp Feature: domain Description: umuC Location: 2360-3620 bp Feature: domain Description: umuC Location: 2360-3620 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), RVT-GII

Seq: AYOV01000057.1 (26514 bp)
Overview 1 RT 1: 3-3820 bp Neighborhood of RT #1 [3, 3846] RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Feature: gene Location: 3-344 bp Feature: gene Location: 369-1856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: gene Location: 1955-2899 bp Feature: gene Location: 2911-3846 bp Feature: domain Description: Phage_CI_repr Location: 2995-3178 bp Feature: domain Description: Phage_CI_repr Location: 2 995-3178 bp Feature: domain Description: Phage_CI_repr Location: 3307-3499 bp Feature: domain Description: Phage_CI_repr Location: 3307-3499 bp Feature: domain Description: Phage_CI_C Location: 3526-3820 bp Feature: domain Description: Phage_CI_C Location: 352 6-382 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), RVT-GII

Seq: AYOV01000066.1 (14562 bp)
Overview 1 RT 1: 59-2360 bp Neighborhood of RT #1 [59, 2374] RVT-GII PRK10276 Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: gene Location: 1552-1719 bp Feature: gene Location: 1949-2374 bp Feature: domain Description: PRK10276 Location: 1952-2360 bp Feature: domain Description: PRK10276 Location: 1952-23 60 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: AYOV01000016.1 (132411 bp)
Overview 1 RT 1: 59-2964 bp Neighborhood of RT #1 [59, 3014] RVT-GII int Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 64 -1154 bp Feature: gene Location: 1552-1719 bp Feature: gene Location: 1962-3014 bp Feature: domain Description: int Location: 1965-2964 bp Feature: domain Description: int Location: 1965-2964 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT int (PHA02601), RVT-GII

Seq: AYOV01000029.1 (35212 bp)
Overview 1 RT 1: 3-2389 bp Neighborhood of RT #1 [3, 2490] RVT-GII PRK10276 PRK10276 Feature: gene Location: 3-215 bp Feature: gene Location: 369-1856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: gene Location: 1946-2125 bp Feature: gene Location: 2173-2490 bp Feature: domain Description: PRK10276 Location: 2179-2293 bp Feature: domain Description: PRK10276 Location: 2179-2293 bp Feature: domain Description: PRK10276 Location: 2320-2389 bp Feature: domain Description: PRK10276 Location: 2320-2389 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: AYOV01000100.1 (4116 bp)
Overview 1 RT 1: 1260-3666 bp Neighborhood of RT #1 [1260, 4058] XerC RVT-GII Feature: gene Location: 1260-1676 bp Feature: domain Description: XerC Location: 1290-1635 bp Feature: domain Description: XerC Location: 1290-16 35 bp Feature: gene Location: 2362-2574 bp Feature: gene Location: 2649-4058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2976-3666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2976 -36 6 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XerC (COG4973), RVT-GII

Seq: AYOV01000095.1 (4792 bp)
Overview 1 RT 1: 1969-4790 bp Neighborhood of RT #1 [1969, 4790] RVT-GII Feature: gene Location: 1969-2139 bp Feature: gene Location: 2473-2703 bp Feature: gene Location: 2937-4424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3342-4032 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3342-4032 bp Feature: gene Location: 4578-4790 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AYOV01000020.1 (117311 bp)
Overview 1 RT 1: 114909-116861 bp Neighborhood of RT #1 [114909, 117253] DinI RVT-GII Feature: gene Location: 114909-115151 bp Feature: domain Description: DinI Location: 114960-115140 bp Feature: domain Description: DinI Location: 114960-115140 bp Feature: gene Location: 115166-115312 bp Feature: gene Location: 115766-117253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116171-116861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116171-1168 61 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-GII

Seq: AYOV01000088.1 (6370 bp)
Overview 1 RT 1: 1539-5920 bp Neighborhood of RT #1 [1539, 6312] SbcB dacD RVT-GII Feature: gene Location: 1539-2963 bp Feature: domain Description: SbcB Location: 1545-2961 bp Feature: domain Description: SbcB Location: 1545-29 61 bp Feature: gene Location: 3138-4307 bp Feature: domain Description: dacD Location: 3147-4302 bp Feature: domain Description: dacD Location: 3147-4302 bp Feature: gene Location: 4825-6312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5230-5920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5230-59 20 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII

Seq: AYOV01000049.1 (36980 bp)
Overview 1 RT 1: 33413-36978 bp Neighborhood of RT #1 [33413, 36978] YccC PRK10016 RVT-GII Feature: gene Location: 33413-34471 bp Feature: domain Description: YccC Location: 33419-34457 bp Feature: domain Description: YccC Location: 33419-34457 bp Feature: gene Location: 34570-35043 bp Feature: domain Description: PRK10016 Location: 34573-35032 bp Feature: domain Description: PRK10 016 Location: 34573-35032 bp Feature: gene Location: 35125-36612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35530-36220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35530-36220 bp Feature: gene Location: 36637-36978 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII

Seq: AYOV01000052.1 (35034 bp)
Overview 1 RT 1: 3-3620 bp Neighborhood of RT #1 [3, 3622] RVT-GII PRK10276 umuC Feature: gene Location: 3-215 bp Feature: gene Location: 369-1856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: gene Location: 1935-2354 bp Feature: domain Description: PRK10276 Location: 1938-2349 bp Feature: domain Description: PRK10276 Location: 1938-2349 bp Feature: gene Location: 2357-3622 bp Feature: domain Description: umuC Location: 2360-3620 bp Feature: domain Description: umuC Location: 2360-3620 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), RVT-GII

Seq: AYOV01000067.1 (14519 bp)
Overview 1 RT 1: 12146-14069 bp Neighborhood of RT #1 [12146, 14461] PRK10276 RVT-GII Feature: gene Location: 12146-12571 bp Feature: domain Description: PRK10276 Location: 12149-12557 bp Feature: domain Description: PRK10276 Location: 12 149-12 557 bp Feature: gene Location: 12765-12977 bp Feature: gene Location: 13052-14461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13379-14069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13379-14069 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII