myRT

myRT report for GCA_000697785.1_gsaco99v01

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Seq: JHTV01000002.1 (27534 bp)
Overview 1 RT 1: 12130-18651 bp Neighborhood of RT #1 [12130, 18677] RVT-AbiK RVT-AbiK PenP MecR1 Transpeptidase Feature: gene Location: 12130-12618 bp Feature: gene Location: 12698-13306 bp Feature: gene Location: 13846-14436 bp Ori: KDP52568.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 14320-14419 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 1 4320-1 441 9 bp Feature: gene Location: 14523-15614 bp Ori: KDP52548.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 14526-14706 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 1 4526-1 4706 bp Feature: gene Location: 15968-16813 bp Ori: KDP52541.1 Feature: domain Description: PenP Location: 15980-16805 bp Feature: domain Description: PenP Location: 1 5980-1 6805 bp Feature: gene Location: 16920-18677 bp Ori: KDP52559.1 Gene: blaR Feature: domain Description: MecR1 Location: 16923-17952 bp Feature: domain Description: MecR1 Location: 1 6923-1 7952 bp Feature: domain Description: Transpeptidase Location: 18006-18651 bp Feature: domain Description: Transpeptidase Location: 1 8006-1 8651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiK, PenP (COG2367), MecR1 (COG4219), Transpeptidase (pfam00905)

Seq: JHTV01000009.1 (28412 bp)
Overview 1 RT 1: 23504-27846 bp Neighborhood of RT #1 [23504, 28175] AlsD PRK08617 RVT-Retrons Feature: gene Location: 23504-24208 bp Ori: KDP51889.1 Gene: budA_2 Feature: domain Description: AlsD Location: 23507-24206 bp Feature: domain Description: AlsD Location: 2 3507-2 42 06 bp Feature: gene Location: 24245-25909 bp Ori: KDP51875.1 Gene: alsS Feature: domain Description: PRK08617 Location: 24254-25901 bp Feature: domain Description: PRK08617 Location: 2 42 54-2 5901 bp Feature: gene Location: 27159-28175 bp Ori: KDP51878.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27309-27846 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 7309-2 7846 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AlsD (COG3527), PRK08617 (acetolactate synthase AlsS), RVT-Retrons