myRT

myRT report for GCA_000698265.1_ASM69826v1

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Seq: CP007637.1 Pseudomonas simiae strain WCS417 genome (6169071 bp)
Overview 1 RT 1: 4403500-4410377 bp 2 RT 2: 4427256-4433726 bp 3 RT 3: 5428826-5435193 bp Neighborhood of RT #1 [4403500, 4410406] MscS RVT-Retrons TPR SEL1 TPR Neighborhood of RT #2 [4427256, 4433726] RVT-UG3 RVT-UG8 Neighborhood of RT #3 [5428826, 5435456] rve_2 RVT-GII RVT-GII DDE_Tnp_IS66 Wzy_C Feature: gene Location: 4403500-4404300 bp Ori: AIB37874.1 Feature: domain Description: MscS Location: 4403608-4404268 bp Feature: domain Description: MscS Location: 4403608-4404268 bp Feature: gene Location: 4404760-4406019 bp Feature: gene Location: 4406183-4407349 bp Ori: AIB37876.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4406438-4407053 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4406438-4407053 bp Feature: gene Location: 4407514-4408224 bp Feature: gene Location: 4408850-4410406 bp Ori: AIB37878.1 Feature: domain Description: TPR Location: 4409447-4409696 bp Feature: domain Description: TPR Location: 4409447-4409696 bp Feature: domain Description: SEL1 Location: 4409726-4409810 bp Feature: domain Description: SEL1 Location: 4409726-440981 0 bp Feature: domain Description: TPR Location: 4409846-4410377 bp Feature: domain Description: TPR Location: 4409846-441 0377 bp Feature: gene Location: 4427256-4427516 bp Feature: gene Location: 4427653-4427958 bp Feature: gene Location: 4428466-4429812 bp Ori: AIB37899.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 4428919-4429393 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 442891 9-4429393 bp Feature: gene Location: 4429805-4431853 bp Ori: AIB37900.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 4430423-4430873 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 4430423-4430873 bp Feature: gene Location: 4432417-4432998 bp Feature: gene Location: 4433133-4433726 bp Feature: gene Location: 5428826-5429038 bp Ori: AIB38783.1 Feature: domain Description: rve_2 Location: 5428844-5428988 bp Feature: domain Description: rve_2 Location: 5428844-5428988 bp Feature: gene Location: 5429144-5430181 bp Feature: gene Location: 5431016-5431270 bp Ori: AIB38785.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5431019-5431259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5431 01 9-5431 259 bp Feature: gene Location: 5431285-5431584 bp Ori: AIB38786.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5431405-5431573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5431 405-5431 573 bp Feature: gene Location: 5432302-5432499 bp Ori: AIB38787.1 Feature: domain Description: DDE_Tnp_IS66 Location: 5432308-5432449 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5432308-5432449 bp Feature: gene Location: 5434074-5435456 bp Ori: AIB38788.1 Feature: domain Description: Wzy_C Location: 5434734-5435193 bp Feature: domain Description: Wzy_C Location: 5434734-54351 93 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MscS (COG0668), RVT-Retrons, TPR (smart00028), SEL1 (smart00671), RVT-UG3, RVT-UG8, rve_2 (pfam13333), RVT-GII, DDE_Tnp_IS66 (pfam03050), Wzy_C (pfam04932)