myRT

myRT report for GCA_000699345.1_11227-1

Download annotations/find similar RTs

Seq: JDWN01000031.1 (36582 bp)
Overview 1 RT 1: 7891-10966 bp Neighborhood of RT #1 [7891, 10971] PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 7891-8109 bp Feature: domain Description: PRK09678 Location: 7894-8092 bp Feature: domain Description: PRK09678 Location: 7894-8092 bp Feature: gene Location: 8356-8544 bp Feature: gene Location: 8987-9286 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 8990-9101 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 8990-91 01 bp Feature: gene Location: 9902-10384 bp Feature: domain Description: SmpB Location: 9932-10376 bp Feature: domain Description: SmpB Location: 9932-1 0376 bp Feature: gene Location: 10495-10971 bp Feature: domain Description: PRK10724 Location: 10501-10966 bp Feature: domain Description: PRK1 0724 Location: 1 0501 -1 0966 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)

Seq: JDWN01000030.1 (65679 bp)
Overview 1 RT 1: 4230-8052 bp Neighborhood of RT #1 [4230, 8052] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 4230-4532 bp Feature: domain Description: InsE Location: 4239-4521 bp Feature: domain Description: InsE Location: 42 39-452 1 bp Feature: gene Location: 4559-4984 bp Feature: domain Description: PHA02517 Location: 4583-4919 bp Feature: domain Description: PHA02 517 Location: 4583-4919 bp Feature: gene Location: 5576-7099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5849-6581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5849-6581 bp Feature: domain Description: GIIM Note: maturase Location: 6656-6854 bp Feature: domain Description: GIIM Note: maturase Location: 6656-6854 bp Feature: gene Location: 7186-7371 bp Feature: gene Location: 7618-8052 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JDWN01000022.1 (82896 bp)
Overview 1 RT 1: 27411-31793 bp Neighborhood of RT #1 [27411, 31793] ArdC RVT-GII Intron_maturas2 HNHc ArdC Feature: gene Location: 27411-27782 bp Feature: gene Location: 27847-28035 bp Feature: domain Description: ArdC Location: 27850-28018 bp Feature: domain Description: ArdC Location: 27850-28018 bp Feature: gene Location: 28116-29975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28383-29214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 283 83 -29214 bp Feature: domain Description: Intron_maturas2 Location: 29304-29586 bp Feature: domain Description: Intron_maturas2 Location: 293 04-29586 bp Feature: domain Description: HNHc Note: nucleases Location: 29730-29907 bp Feature: domain Description: HNHc Note: nucleases Location: 2973 0-29907 bp Feature: gene Location: 29975-31327 bp Feature: domain Description: ArdC Location: 29990-30716 bp Feature: domain Description: ArdC Location: 29990-3 0716 bp Feature: gene Location: 31392-31793 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: JDWN01000074.1 (2983 bp)
Overview 1 RT 1: 54-2980 bp Neighborhood of RT #1 [54, 2980] RVT-Retrons Feature: gene Location: 54-392 bp Feature: gene Location: 609-1904 bp Feature: gene Location: 2093-2764 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2318-2621 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2318-2621 bp Feature: gene Location: 2810-2980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons