myRT

myRT report for GCA_000700225.1_ASM70022v1

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Seq: JNMG01000050.1 (27868 bp)
Overview 1 RT 1: 14215-18676 bp Neighborhood of RT #1 [14215, 18732] PRK09692 RVT-Retrons Psu PRK09678 Feature: gene Location: 14215-15405 bp Feature: domain Description: PRK09692 Location: 14218-15397 bp Feature: domain Description: PRK09692 Location: 1 421 8-1 5397 bp Feature: gene Location: 15647-16621 bp Feature: gene Location: 16618-17565 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16720-17311 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 6720-1 731 1 bp Feature: gene Location: 17904-18470 bp Feature: domain Description: Psu Location: 17922-18465 bp Feature: domain Description: Psu Location: 1 7922-1 8465 bp Feature: gene Location: 18487-18732 bp Feature: domain Description: PRK09678 Location: 18490-18676 bp Feature: domain Description: PRK09678 Location: 1 8490-1 8676 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, Psu (pfam07455), PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: JNMG01000081.1 (8835 bp)
Overview 1 RT 1: 1030-8836 bp Neighborhood of RT #1 [1030, 8835] bcsA PRK11114 RVT-GII GIIM RAYT PRK11447 Feature: gene Location: 1030-3135 bp Feature: domain Description: bcsA Location: 1072-3121 bp Feature: domain Description: bcsA Location: 1072 -312 1 bp Feature: gene Location: 3199-5349 bp Feature: domain Description: PRK11114 Location: 3259-5332 bp Feature: domain Description: PRK11114 Location: 32 59-5332 bp Feature: gene Location: 6093-7334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6381-6999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6381-6999 bp Feature: domain Description: GIIM Note: maturase Location: 7047-7278 bp Feature: domain Description: GIIM Note: maturase Location: 7047-72 78 bp Feature: gene Location: 7869-8132 bp Feature: domain Description: RAYT Location: 7872-8034 bp Feature: domain Description: RAYT Location: 7872 -8034 bp Feature: gene Location: 8479-8835 bp Feature: domain Description: PRK11447 Location: 8482-8836 bp Feature: domain Description: PRK11447 Location: 8482 -8836 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT bcsA (PRK11498), PRK11114 (cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB), RVT-GII, GIIM (pfam08388), RAYT (COG1943), PRK11447 (cellulose synthase subunit BcsC; Provisional)

Seq: JNMG01000054.1 (24143 bp)
Overview 1 RT 1: 6989-11536 bp Neighborhood of RT #1 [6989, 11536] DUF3987 Inovirus_Gp2 RVT-GII Feature: gene Location: 6989-7735 bp Feature: domain Description: DUF3987 Location: 6995-7472 bp Feature: domain Description: DUF3 987 Location: 6995-7472 bp Feature: gene Location: 8701-9264 bp Feature: domain Description: Inovirus_Gp2 Location: 8758-9199 bp Feature: domain Description: Inovirus_Gp2 Location: 8758-9199 bp Feature: gene Location: 9912-10751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10026-10638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10026-1063 8 bp Feature: gene Location: 10738-10923 bp Feature: gene Location: 11411-11536 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3987 (pfam13148), Inovirus_Gp2 (pfam11726), RVT-GII