myRT

myRT report for GCA_000700325.1_ASM70032v1

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Seq: JNML01000027.1 (61033 bp)
Overview 1 RT 1: 3791-8057 bp 2 RT 2: 10572-16185 bp Neighborhood of RT #1 [3791, 8062] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Neighborhood of RT #2 [10572, 16220] PRK13704 RVT_N RVT-GII GIIM HNHc DUF932 Feature: gene Location: 3791-3982 bp Feature: gene Location: 4604-4732 bp Feature: gene Location: 5334-7235 bp Ori: KDT91610.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5601-6432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5601 -6432 bp Feature: domain Description: Intron_maturas2 Location: 6546-6804 bp Feature: domain Description: Intron_maturas2 Location: 6546-6804 bp Feature: domain Description: HNHc Note: nucleases Location: 6978-7140 bp Feature: domain Description: HNHc Note: nucleases Location: 6978-71 40 bp Feature: gene Location: 7445-7771 bp Ori: KDT91611.1 Gene: ssbF Feature: domain Description: PRK13732 Location: 7448-7724 bp Feature: domain Description: PRK1 3732 Location: 7448-7724 bp Feature: gene Location: 7829-8062 bp Ori: KDT91612.1 Feature: domain Description: DUF905 Location: 7859-8057 bp Feature: domain Description: DUF905 Location: 7859-8057 bp Feature: gene Location: 10572-11291 bp Ori: KDT91615.1 Feature: domain Description: PRK13704 Location: 10575-11286 bp Feature: domain Description: PRK1 3704 Location: 1 0575-1 1 286 bp Feature: gene Location: 11303-11491 bp Feature: gene Location: 12124-13791 bp Ori: KDT91617.1 Feature: domain Description: RVT_N Location: 12172-12409 bp Feature: domain Description: RVT_N Location: 1 21 72-1 2409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12460-13102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2460-1 31 02 bp Feature: domain Description: GIIM Note: maturase Location: 13153-13387 bp Feature: domain Description: GIIM Note: maturase Location: 1 31 53-1 3387 bp Feature: domain Description: HNHc Note: nucleases Location: 13597-13756 bp Feature: domain Description: HNHc Note: nucleases Location: 1 3597-1 3756 bp Feature: gene Location: 14993-15280 bp Feature: gene Location: 15399-16220 bp Ori: KDT91619.1 Feature: domain Description: DUF932 Location: 15507-16185 bp Feature: domain Description: DUF932 Location: 1 5507-1 61 85 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006), PRK13704 (plasmid SOS inhibition protein A; Provisional), RVT_N (pfam13655), GIIM (pfam08388), DUF932 (pfam06067)

Seq: JNML01000048.1 (14555 bp)
Overview 1 RT 1: 404-3263 bp Neighborhood of RT #1 [404, 3274] RVT-GII GIIM RVT-GII PHA02517 InsE Feature: gene Location: 404-1099 bp Ori: KDT88117.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 410-581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 410-581 bp Feature: domain Description: GIIM Note: maturase Location: 656-875 bp Feature: domain Description: GIIM Note: maturase Location: 656-875 bp Feature: gene Location: 1074-1913 bp Ori: KDT88118.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1332-1788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1332 -1788 bp Feature: gene Location: 2520-2945 bp Ori: KDT88119.1 Feature: domain Description: PHA02517 Location: 2544-2880 bp Feature: domain Description: PHA02 517 Location: 2 544-2 880 bp Feature: gene Location: 2972-3274 bp Ori: KDT88120.1 Feature: domain Description: InsE Location: 2981-3263 bp Feature: domain Description: InsE Location: 2 981-32 63 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)