myRT

myRT report for GCA_000700345.1_ASM70034v1

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Seq: JNMM01000004.1 (294281 bp)
Overview 1 RT 1: 223669-230413 bp Neighborhood of RT #1 [223669, 230413] Psu RVT-UG7 PRK09692 Feature: gene Location: 223669-224241 bp Ori: KDU00395.1 Feature: domain Description: Psu Location: 223687-224224 bp Feature: domain Description: Psu Location: 223687-224224 bp Feature: gene Location: 224409-224528 bp Feature: gene Location: 225281-226909 bp Ori: KDU00621.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 225689-226118 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 225689-2261 1 8 bp Feature: gene Location: 226902-228086 bp Ori: KDU00430.1 Feature: domain Description: PRK09692 Location: 226908-228063 bp Feature: domain Description: PRK09692 Location: 226908-228063 bp Feature: gene Location: 228641-230413 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Psu (pfam07455), RVT-UG7, PRK09692 (Integrase; provisional)

Seq: JNMM01000042.1 (3711 bp)
Overview 1 RT 1: 1-1772 bp Neighborhood of RT #1 [1, 1772] RVT-GII GIIM PHA02517 Feature: gene Location: 1-831 bp Ori: KDT92560.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19-313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19-313 bp Feature: domain Description: GIIM Note: maturase Location: 388-607 bp Feature: domain Description: GIIM Note: maturase Location: 388-607 bp Feature: gene Location: 1023-1394 bp Ori: KDT92558.1 Feature: domain Description: PHA02517 Location: 1026-1392 bp Feature: domain Description: PHA02 517 Location: 102 6-1392 bp Feature: gene Location: 1602-1772 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JNMM01000002.1 (415175 bp)
Overview 1 RT 1: 262468-268462 bp 2 RT 2: 378307-381941 bp Neighborhood of RT #1 [262468, 268470] DUF5405 Phage_GPA RVT-AbiP2 Q Neighborhood of RT #2 [378307, 381941] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 262468-262743 bp Ori: KDU01507.1 Feature: domain Description: DUF5405 Location: 262489-262726 bp Feature: domain Description: DUF5405 Location: 262489-262726 bp Feature: gene Location: 262733-265009 bp Ori: KDU01353.1 Feature: domain Description: Phage_GPA Location: 263132-264119 bp Feature: domain Description: Phage_GPA Location: 263 13 2-264119 bp Feature: gene Location: 265497-267167 bp Ori: KDU01495.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 266040-266493 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 266040-266493 bp Feature: gene Location: 267236-267397 bp Feature: gene Location: 267436-268470 bp Ori: KDU01459.1 Feature: domain Description: Q Location: 267439-268462 bp Feature: domain Description: Q Location: 26743 9-268462 bp Feature: gene Location: 378307-378582 bp Ori: KDU01291.1 Feature: domain Description: InsE Location: 378328-378580 bp Feature: domain Description: InsE Location: 3 783 28-3 78580 bp Feature: gene Location: 378582-379061 bp Ori: KDU01389.1 Feature: domain Description: PHA02517 Location: 378642-378996 bp Feature: domain Description: PHA02517 Location: 3 78642-3 78996 bp Feature: gene Location: 379668-381176 bp Ori: KDU01301.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 379926-380658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 79926-3 80658 bp Feature: domain Description: GIIM Note: maturase Location: 380733-380931 bp Feature: domain Description: GIIM Note: maturase Location: 3 8073 3 -3 8093 1 bp Feature: gene Location: 381371-381745 bp Ori: KDU01563.1 Feature: domain Description: PHA02517 Location: 381374-381734 bp Feature: domain Description: PHA02517 Location: 3 813 74-3 8173 4 bp Feature: gene Location: 381828-381941 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5405 (pfam17399), Phage_GPA (pfam05840), RVT-AbiP2, Q (PHA02536), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)