myRT

myRT report for GCA_000700565.1_ASM70056v1

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Seq: JNNE01000006.1 (7997 bp)
Overview 1 RT 1: 22-2876 bp Neighborhood of RT #1 [22, 2890] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 22-1530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280-1012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280-1 01 2 bp Feature: domain Description: GIIM Note: maturase Location: 1087-1285 bp Feature: domain Description: GIIM Note: maturase Location: 1 087-1 285 bp Feature: gene Location: 2137-2376 bp Feature: domain Description: PHA02517 Location: 2140-2311 bp Feature: domain Description: PHA0251 7 Location: 21 40-231 1 bp Feature: gene Location: 2618-2890 bp Feature: domain Description: InsE Location: 2627-2876 bp Feature: domain Description: InsE Location: 2627-2876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: JNNE01000041.1 (2422 bp)
Overview 1 RT 1: 1-1506 bp Neighborhood of RT #1 [1, 1751] PHA02517 RVT-GII GIIM Feature: gene Location: 1-125 bp Feature: domain Description: PHA02517 Location: 4-121 bp Feature: domain Description: PHA02 517 Location: 4-12 1 bp Feature: gene Location: 243-1751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 501-1233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 501-12 33 bp Feature: domain Description: GIIM Note: maturase Location: 1308-1506 bp Feature: domain Description: GIIM Note: maturase Location: 1308-1506 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JNNE01000135.1 (80926 bp)
Overview 1 RT 1: 54489-58371 bp Neighborhood of RT #1 [54489, 58376] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 54489-54947 bp Feature: domain Description: dut Location: 54495-54942 bp Feature: domain Description: dut Location: 54495-54942 bp Feature: gene Location: 55054-55650 bp Feature: domain Description: slmA Location: 55060-55636 bp Feature: domain Description: slmA Location: 55060-5563 6 bp Feature: gene Location: 55696-56655 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 55831-56380 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5583 1-563 80 bp Feature: gene Location: 56953-57594 bp Feature: domain Description: pyrE Location: 56956-57589 bp Feature: domain Description: pyrE Location: 56956-57589 bp Feature: gene Location: 57660-58376 bp Feature: domain Description: rph Location: 57663-58371 bp Feature: domain Description: rph Location: 57663 -583 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: JNNE01000043.1 (2462 bp)
Overview 1 RT 1: 87-2196 bp Neighborhood of RT #1 [87, 2441] PHA02517 RVT-GII GIIM Feature: gene Location: 87-326 bp Feature: domain Description: PHA02517 Location: 90-261 bp Feature: domain Description: PHA02517 Location: 90-261 bp Feature: gene Location: 933-2441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1191-1923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1191-1923 bp Feature: domain Description: GIIM Note: maturase Location: 1998-2196 bp Feature: domain Description: GIIM Note: maturase Location: 1998-2196 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JNNE01000088.1 (12194 bp)
Overview 1 RT 1: 9107-11278 bp Neighborhood of RT #1 [9107, 11523] RVT-GII GIIM Feature: gene Location: 9107-9250 bp Feature: gene Location: 9686-9820 bp Feature: gene Location: 10015-11523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10273-11005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10273-11005 bp Feature: domain Description: GIIM Note: maturase Location: 11080-11278 bp Feature: domain Description: GIIM Note: maturase Location: 11080-11278 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JNNE01000121.1 (388948 bp)
Overview 1 RT 1: 672-3289 bp Neighborhood of RT #1 [672, 3324] RVT-GII GIIM PHA02517 TagG Feature: gene Location: 672-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-16 6 2 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: gene Location: 2357-2743 bp Feature: domain Description: PHA02517 Location: 2360-2741 bp Feature: domain Description: PHA02517 Location: 236 0-2741 bp Feature: gene Location: 2746-3324 bp Feature: domain Description: TagG Location: 2767-3289 bp Feature: domain Description: TagG Location: 276 7-3289 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), TagG (COG1682), RVT-GII, GIIM (pfam08388)

Seq: JNNE01000040.1 (3372 bp)
Overview 1 RT 1: 22-2863 bp Neighborhood of RT #1 [22, 2877] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 22-1530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280-1012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280-1012 bp Feature: domain Description: GIIM Note: maturase Location: 1087-1285 bp Feature: domain Description: GIIM Note: maturase Location: 1087 -1285 bp Feature: gene Location: 2137-2376 bp Feature: domain Description: PHA02517 Location: 2140-2311 bp Feature: domain Description: PHA02517 Location: 2140-2311 bp Feature: gene Location: 2575-2877 bp Feature: domain Description: InsE Location: 2578-2863 bp Feature: domain Description: InsE Location: 257 8-2863 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)