myRT

myRT report for GCA_000700665.1_ASM70066v1

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Seq: JNMW01000077.1 (5429 bp)
Overview 1 RT 1: 1965-5395 bp Neighborhood of RT #1 [1965, 5397] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 1965-2240 bp Feature: domain Description: InsE Location: 1986-2238 bp Feature: domain Description: InsE Location: 1 986-2238 bp Feature: gene Location: 2240-2719 bp Feature: domain Description: PHA02517 Location: 2300-2654 bp Feature: domain Description: PHA0251 7 Location: 2300-2654 bp Feature: gene Location: 3326-4834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3584-4316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3584-431 6 bp Feature: domain Description: GIIM Note: maturase Location: 4391-4589 bp Feature: domain Description: GIIM Note: maturase Location: 4391 -4589 bp Feature: gene Location: 5026-5397 bp Feature: domain Description: PHA02517 Location: 5029-5395 bp Feature: domain Description: PHA0251 7 Location: 5029-5395 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JNMW01000051.1 (16662 bp)
Overview 1 RT 1: 736-3634 bp Neighborhood of RT #1 [736, 3657] PRK14702 DDE_Tnp_IS66 RVT-GII DDE_Tnp_IS66_C Feature: gene Location: 736-1089 bp Feature: domain Description: PRK14702 Location: 739-1078 bp Feature: domain Description: PRK14702 Location: 739-1078 bp Feature: gene Location: 1327-1701 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1339-1660 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1339-1660 bp Feature: gene Location: 2268-2771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2364-2769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 364-2 769 bp Feature: gene Location: 3508-3657 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3523-3634 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 352 3-3634 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, DDE_Tnp_IS66_C (pfam13817)

Seq: JNMW01000090.1 (3287 bp)
Overview 1 RT 1: 58-2946 bp Neighborhood of RT #1 [58, 2948] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 58-270 bp Feature: domain Description: PHA02517 Location: 61-205 bp Feature: domain Description: PHA02517 Location: 61-205 bp Feature: gene Location: 877-2385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1135-1867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113 5-1867 bp Feature: domain Description: GIIM Note: maturase Location: 1942-2140 bp Feature: domain Description: GIIM Note: maturase Location: 1942-2140 bp Feature: gene Location: 2577-2948 bp Feature: domain Description: PHA02517 Location: 2580-2946 bp Feature: domain Description: PHA02517 Location: 2580-2946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JNMW01000071.1 (7065 bp)
Overview 1 RT 1: 3637-6253 bp Neighborhood of RT #1 [3637, 6348] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 3637-3870 bp Feature: domain Description: DUF905 Location: 3667-3865 bp Feature: domain Description: DUF905 Location: 3667-3865 bp Feature: gene Location: 3926-4351 bp Feature: domain Description: PRK13732 Location: 3929-4349 bp Feature: domain Description: PRK13732 Location: 3929-4 34 9 bp Feature: gene Location: 4561-6348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4714-5545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 714 -554 5 bp Feature: domain Description: Intron_maturas2 Location: 5659-5917 bp Feature: domain Description: Intron_maturas2 Location: 5659-5917 bp Feature: domain Description: HNHc Note: nucleases Location: 6091-6253 bp Feature: domain Description: HNHc Note: nucleases Location: 6091-6253 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)