myRT

myRT report for GCA_000702225.1_ASM70222v1

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Seq: JNKX01000043.1 Bacteroides sp. Ga6A2 T538DRAFT_scaffold00037.37_C, whole genome shotgun sequence (33180 bp)
Overview 1 RT 1: 14493-19066 bp Neighborhood of RT #1 [14493, 19074] 2-Hacid_dh_4 RVT-Retrons kpsF PRK05198 Feature: gene Location: 14493-14633 bp Feature: gene Location: 14635-15597 bp Feature: domain Description: 2-Hacid_dh_4 Location: 14644-15565 bp Feature: domain Description: 2-Hacid_dh_4 Location: 1 4644-1 5565 bp Feature: gene Location: 15867-17300 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16134-16716 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 61 34-1 671 6 bp Feature: gene Location: 17355-18305 bp Feature: domain Description: kpsF Location: 17481-18282 bp Feature: domain Description: kpsF Location: 1 7481 -1 8282 bp Feature: gene Location: 18313-19074 bp Feature: domain Description: PRK05198 Location: 18322-19066 bp Feature: domain Description: PRK051 98 Location: 1 8322-1 9066 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 2-Hacid_dh_4 (cd12162), RVT-Retrons, kpsF (TIGR00393), PRK05198 (2-dehydro-3-deoxyphosphooctonate aldolase; Provisional)

Seq: JNKX01000052.1 Bacteroides sp. Ga6A2 T538DRAFT_scaffold00046.46_C, whole genome shotgun sequence (21717 bp)
Overview 1 RT 1: 15391-21705 bp Neighborhood of RT #1 [15391, 21716] WYL WG_beta_rep WG_beta_rep RVT-Retrons DDE_Tnp_1_4 Feature: gene Location: 15391-16467 bp Feature: domain Description: WYL Location: 15877-16438 bp Feature: domain Description: WYL Location: 15877-16438 bp Feature: gene Location: 16512-17138 bp Feature: domain Description: WG_beta_rep Location: 16578-16677 bp Feature: domain Description: WG_beta_rep Location: 16578-16677 bp Feature: domain Description: WG_beta_rep Location: 16815-16890 bp Feature: domain Description: WG_beta_rep Location: 16815-16890 bp Feature: gene Location: 17501-18979 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 17699-18314 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 17699-18314 bp Feature: gene Location: 18982-19911 bp Feature: gene Location: 20454-21716 bp Feature: domain Description: DDE_Tnp_1_4 Location: 20478-21705 bp Feature: domain Description: DDE_Tnp_1_4 Location: 2 0478-2 1705 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WYL (pfam13280), WG_beta_rep (pfam14903), RVT-Retrons, DDE_Tnp_1_4 (pfam13701)

Seq: JNKX01000083.1 Bacteroides sp. Ga6A2 T538DRAFT_scaffold00076.76_C, whole genome shotgun sequence (1946 bp)
Overview 1 RT 1: 103-1944 bp Neighborhood of RT #1 [103, 1944] RVT-GII GIIM Feature: gene Location: 103-1515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 445-1063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 445-1063 bp Feature: domain Description: GIIM Note: maturase Location: 1120-1327 bp Feature: domain Description: GIIM Note: maturase Location: 1120-13 27 bp Feature: gene Location: 1786-1944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)