myRT

myRT report for GCA_000702285.1_ASM70228v1

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Seq: JNLA01000046.1 Bacteroides sp. Ga6A1 T544DRAFT_scaffold00039.39_C, whole genome shotgun sequence (33127 bp)
Overview 1 RT 1: 14144-20372 bp Neighborhood of RT #1 [14144, 20372] PRK05198 kpsF RVT-Retrons 2-Hacid_dh_4 Feature: gene Location: 14144-14905 bp Feature: domain Description: PRK05198 Location: 14153-14897 bp Feature: domain Description: PRK051 98 Location: 1 41 53-1 4897 bp Feature: gene Location: 14913-15863 bp Feature: domain Description: kpsF Location: 15039-15840 bp Feature: domain Description: kpsF Location: 1 5039-1 5840 bp Feature: gene Location: 15918-17351 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16185-16767 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 61 85-1 6767 bp Feature: gene Location: 17621-18583 bp Feature: domain Description: 2-Hacid_dh_4 Location: 17630-18551 bp Feature: domain Description: 2-Hacid_dh_4 Location: 1 7630-1 8551 bp Feature: gene Location: 18735-20372 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05198 (2-dehydro-3-deoxyphosphooctonate aldolase; Provisional), kpsF (TIGR00393), RVT-Retrons, 2-Hacid_dh_4 (cd12162)

Seq: JNLA01000055.1 Bacteroides sp. Ga6A1 T544DRAFT_scaffold00048.48_C, whole genome shotgun sequence (20628 bp)
Overview 1 RT 1: 2-5242 bp Neighborhood of RT #1 [2, 5271] RVT-Retrons WG_beta_rep WG_beta_rep WYL Feature: gene Location: 2-208 bp Feature: gene Location: 751-1680 bp Feature: gene Location: 1683-3161 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1881-2496 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1881-2 496 bp Feature: gene Location: 3524-4150 bp Feature: domain Description: WG_beta_rep Location: 3590-3689 bp Feature: domain Description: WG_beta_rep Location: 3590-3689 bp Feature: domain Description: WG_beta_rep Location: 3827-3902 bp Feature: domain Description: WG_beta_rep Location: 382 7-3902 bp Feature: gene Location: 4195-5271 bp Feature: domain Description: WYL Location: 4681-5242 bp Feature: domain Description: WYL Location: 4681-52 42 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, WYL (pfam13280)

Seq: JNLA01000082.1 Bacteroides sp. Ga6A1 T544DRAFT_scaffold00075.75_C, whole genome shotgun sequence (1946 bp)
Overview 1 RT 1: 103-1944 bp Neighborhood of RT #1 [103, 1944] RVT-GII GIIM Feature: gene Location: 103-1515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 445-1063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 445-1063 bp Feature: domain Description: GIIM Note: maturase Location: 1120-1327 bp Feature: domain Description: GIIM Note: maturase Location: 1120-13 27 bp Feature: gene Location: 1786-1944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)