myRT

myRT report for GCA_000702345.1_ASM70234v1

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Seq: JNLS01000035.1 Salinispora arenicola strain CNH996 CC96DRAFT_scaffold00029.29_C, whole genome shotgun sequence (63640 bp)
Overview 1 RT 1: 121-4917 bp Neighborhood of RT #1 [121, 4917] RVT_N RVT-GII GIIM HNH SF2-N SF2-N Feature: gene Location: 121-1917 bp Feature: RT Description: RVT_N Location: 214-460 bp Feature: RT Description: RVT_N Location: 21 4-460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 508-1159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 508-1 1 59 bp Feature: domain Description: GIIM Note: maturase Location: 1210-1444 bp Feature: domain Description: GIIM Note: maturase Location: 1 21 0-1 444 bp Feature: domain Description: HNH Note: nucleases Location: 1774-1873 bp Feature: domain Description: HNH Note: nucleases Location: 1 774-1 873 bp Feature: gene Location: 2576-3559 bp Feature: domain Description: SF2-N Location: 2744-2825 bp Feature: domain Description: SF2-N Location: 2744-2825 bp Feature: domain Description: SF2-N Location: 3500-3548 bp Feature: domain Description: SF2-N Location: 3500-3548 bp Feature: gene Location: 3556-4917 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), SF2-N (cd00046)

Seq: JNLS01000045.1 Salinispora arenicola strain CNH996 CC96DRAFT_scaffold00039.39_C, whole genome shotgun sequence (47220 bp)
Overview 1 RT 1: 43138-46480 bp Neighborhood of RT #1 [43138, 46524] Replic_Relax RVT_N RVT-GII GIIM HNH Feature: gene Location: 43138-43956 bp Feature: domain Description: Replic_Relax Location: 43186-43708 bp Feature: domain Description: Replic_Relax Location: 43186-43708 bp Feature: gene Location: 44019-44741 bp Feature: gene Location: 44728-46524 bp Feature: RT Description: RVT_N Location: 44821-45067 bp Feature: RT Description: RVT_N Location: 4482 1-45067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45115-45766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45115-45766 bp Feature: domain Description: GIIM Note: maturase Location: 45817-46051 bp Feature: domain Description: GIIM Note: maturase Location: 45817-46051 bp Feature: domain Description: HNH Note: nucleases Location: 46381-46480 bp Feature: domain Description: HNH Note: nucleases Location: 46381-46480 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Replic_Relax (pfam13814), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: JNLS01000070.1 Salinispora arenicola strain CNH996 CC96DRAFT_scaffold00064.64_C, whole genome shotgun sequence (20527 bp)
Overview 1 RT 1: 121-4935 bp Neighborhood of RT #1 [121, 4935] RVT_N RVT-GII GIIM HNH SF2-N Feature: gene Location: 121-1845 bp Feature: RT Description: RVT_N Location: 142-388 bp Feature: RT Description: RVT_N Location: 142-3 88 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 436-1087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 6-1087 bp Feature: domain Description: GIIM Note: maturase Location: 1138-1372 bp Feature: domain Description: GIIM Note: maturase Location: 113 8-13 72 bp Feature: domain Description: HNH Note: nucleases Location: 1702-1801 bp Feature: domain Description: HNH Note: nucleases Location: 1702-1801 bp Feature: gene Location: 2576-3559 bp Feature: domain Description: SF2-N Location: 2744-3548 bp Feature: domain Description: SF2-N Location: 2744-3 548 bp Feature: gene Location: 3556-4935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), SF2-N (cd00046)

Seq: JNLS01000080.1 Salinispora arenicola strain CNH996 CC96DRAFT_scaffold00074.74_C, whole genome shotgun sequence (12715 bp)
Overview 1 RT 1: 8619-11903 bp Neighborhood of RT #1 [8619, 11947] Replic_Relax RVT_N RVT-GII GIIM HNH Feature: gene Location: 8619-9431 bp Feature: domain Description: Replic_Relax Location: 8667-9189 bp Feature: domain Description: Replic_Relax Location: 8667-9189 bp Feature: gene Location: 9478-10080 bp Feature: gene Location: 10223-11947 bp Feature: RT Description: RVT_N Location: 10244-10490 bp Feature: RT Description: RVT_N Location: 1024 4 -104 90 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10538-11189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10538-11189 bp Feature: domain Description: GIIM Note: maturase Location: 11240-11474 bp Feature: domain Description: GIIM Note: maturase Location: 1124 0-114 74 bp Feature: domain Description: HNH Note: nucleases Location: 11804-11903 bp Feature: domain Description: HNH Note: nucleases Location: 11804 -11903 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), Replic_Relax (pfam13814)

Seq: JNLS01000124.1 Salinispora arenicola strain CNH996 CC96DRAFT_scaffold00117.117_C, whole genome shotgun sequence (2185 bp)
Overview 1 RT 1: 607-1927 bp Neighborhood of RT #1 [607, 2127] RVT-GII GIIM Feature: gene Location: 607-2127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 937-1630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 937-1630 bp Feature: domain Description: GIIM Note: maturase Location: 1696-1927 bp Feature: domain Description: GIIM Note: maturase Location: 1696-1927 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JNLS01000132.1 Salinispora arenicola strain CNH996 CC96DRAFT_scaffold00125.125_C, whole genome shotgun sequence (1850 bp)
Overview 1 RT 1: 270-1587 bp Neighborhood of RT #1 [270, 1736] RVT-GII GIIM Feature: gene Location: 270-1736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 606-1302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 06 -1302 bp Feature: domain Description: GIIM Note: maturase Location: 1371-1587 bp Feature: domain Description: GIIM Note: maturase Location: 1371-1587 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)