myRT

myRT report for GCA_000702985.1_ASM70298v1

Download annotations/find similar RTs

Seq: JNLG01000001.1 Lachnoclostridium phytofermentans KNHs2132 BO16DRAFT_scf7180000000002_quiver_dupTrim_5909.1_C, whole genome shotgun sequence (4711709 bp)
Overview 1 RT 1: 2300-8875 bp 2 RT 2: 4194554-4200643 bp Neighborhood of RT #1 [2300, 8880] HEAT_2 HEAT_2 Methyltransf_11 RVT-GII PRK01286 PRK01286 SPOUT_MTase Neighborhood of RT #2 [4194554, 4200702] RVT-UG14 DUF4263 TrmA Feature: gene Location: 2300-3859 bp Feature: domain Description: HEAT_2 Location: 2660-2777 bp Feature: domain Description: HEAT_2 Location: 2660-2777 bp Feature: domain Description: HEAT_2 Location: 3347-3524 bp Feature: domain Description: HEAT_2 Location: 3347-3524 bp Feature: gene Location: 4352-5113 bp Feature: domain Description: Methyltransf_11 Location: 4478-4757 bp Feature: domain Description: Methyltransf_1 1 Location: 4478-4757 bp Feature: gene Location: 5086-5649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5392-5599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5392-5599 bp Feature: gene Location: 6144-8060 bp Feature: domain Description: PRK01286 Location: 6690-7800 bp Feature: domain Description: PRK01 286 Location: 6690-7800 bp Feature: domain Description: PRK01286 Location: 7956-8055 bp Feature: domain Description: PRK01 286 Location: 7956-8055 bp Feature: gene Location: 8401-8880 bp Feature: domain Description: SPOUT_MTase Location: 8404-8875 bp Feature: domain Description: SPOUT_MTase Location: 8404-8875 bp Feature: gene Location: 4194554-4195279 bp Feature: gene Location: 4195342-4196046 bp Feature: gene Location: 4196217-4197773 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 4196568-4196925 bp Feature: RT Description: RVT-UG1 4 Note: UG1 4 RT Location: 41 96568-41 96925 bp Feature: gene Location: 4198312-4199097 bp Feature: domain Description: DUF4263 Location: 4198579-4199065 bp Feature: domain Description: DUF4263 Location: 41 98579-41 99065 bp Feature: gene Location: 4199278-4200702 bp Feature: domain Description: TrmA Location: 4199308-4200643 bp Feature: domain Description: TrmA Location: 41 99308-4200643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEAT_2 (pfam13646), Methyltransf_11 (pfam08241), RVT-GII, PRK01286 (deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional), SPOUT_MTase (pfam02590), RVT-UG14, DUF4263 (pfam14082), TrmA (COG2265)