myRT

myRT report for GCA_000703165.1_ASM70316v1

Download annotations/find similar RTs

Seq: JNLQ01000002.1 Butyrivibrio sp. AE3004 BV60DRAFT_scf7180000000012_quiver.2_C, whole genome shotgun sequence (3630828 bp)
Overview 1 RT 1: 1084416-1090769 bp Neighborhood of RT #1 [1084416, 1090825] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII GIIM ATPgrasp_ST Glycos_transf_2 YdcF-like Feature: gene Location: 1084416-1084760 bp Feature: domain Description: TnpB_IS66 Location: 1084446-1084743 bp Feature: domain Description: TnpB_IS66 Location: 1 084446-1 084743 bp Feature: gene Location: 1084911-1086578 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1085076-1085292 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 085076-1 085292 bp Feature: domain Description: zf-IS66 Location: 1085316-1085451 bp Feature: domain Description: zf-IS66 Location: 1 08531 6-1 085451 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1085511-1086372 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 08551 1 -1 086372 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1086390-1086507 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 086390-1 086507 bp Feature: gene Location: 1087183-1088535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1087492-1088182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 087492-1 0881 82 bp Feature: domain Description: GIIM Note: maturase Location: 1088263-1088464 bp Feature: domain Description: GIIM Note: maturase Location: 1 088263-1 088464 bp Feature: gene Location: 1088627-1089454 bp Feature: domain Description: ATPgrasp_ST Location: 1089233-1089383 bp Feature: domain Description: ATPgrasp_ST Location: 1 089233-1 089383 bp Feature: gene Location: 1089509-1090825 bp Feature: domain Description: Glycos_transf_2 Location: 1089521-1090010 bp Feature: domain Description: Glycos_transf_2 Location: 1 089521 -1 09001 0 bp Feature: domain Description: YdcF-like Location: 1090403-1090769 bp Feature: domain Description: YdcF-like Location: 1 090403-1 090769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), ATPgrasp_ST (pfam14397), Glycos_transf_2 (pfam00535), YdcF-like (cl00630)