myRT

myRT report for GCA_000703305.1_Ec2010C-4211

Download annotations/find similar RTs

Seq: JASS01000001.1 Escherichia coli O45:H2 str. 2010C-4211 contig1, whole genome shotgun sequence (2621278 bp)
Overview 1 RT 1: 1203882-1210227 bp 2 RT 2: 1363423-1367703 bp 3 RT 3: 2607049-2615324 bp Neighborhood of RT #1 [1203882, 1210229] InsE Autotransporter RVT-GII Intron_maturas2 HNHc Antirestrict RadC Neighborhood of RT #2 [1363423, 1367786] DUF932 RVT-GII Intron_maturas2 HNHc Ivy Neighborhood of RT #3 [2607049, 2615326] Antirestrict DUF932 RVT-GII Intron_maturas2 HNHc AidA YeeP Feature: gene Location: 1203882-1204208 bp Feature: domain Description: InsE Location: 1203885-1204206 bp Feature: domain Description: InsE Location: 1 203885-1 204206 bp Feature: gene Location: 1204577-1205551 bp Feature: domain Description: Autotransporter Location: 1204670-1205477 bp Feature: domain Description: Autotransporter Location: 1 204670-1 205477 bp Feature: gene Location: 1206825-1208603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1207086-1207881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 207086-1 207881 bp Feature: domain Description: Intron_maturas2 Location: 1208007-1208232 bp Feature: domain Description: Intron_maturas2 Location: 1 208007-1 208232 bp Feature: domain Description: HNHc Note: nucleases Location: 1208427-1208577 bp Feature: domain Description: HNHc Note: nucleases Location: 1 208427-1 208577 bp Feature: gene Location: 1209253-1209738 bp Feature: domain Description: Antirestrict Location: 1209451-1209736 bp Feature: domain Description: Antirestrict Location: 1 209451 -1 209736 bp Feature: gene Location: 1209753-1210229 bp Feature: domain Description: RadC Location: 1209783-1210227 bp Feature: domain Description: RadC Location: 1 209783-1 21 0227 bp Feature: gene Location: 1363423-1363668 bp Feature: gene Location: 1363668-1364054 bp Feature: domain Description: DUF932 Location: 1363674-1364019 bp Feature: domain Description: DUF932 Location: 1 363674-1 36401 9 bp Feature: gene Location: 1364227-1366005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1364488-1365283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 364488-1 365283 bp Feature: domain Description: Intron_maturas2 Location: 1365409-1365634 bp Feature: domain Description: Intron_maturas2 Location: 1 365409-1 365634 bp Feature: domain Description: HNHc Note: nucleases Location: 1365829-1365979 bp Feature: domain Description: HNHc Note: nucleases Location: 1 365829-1 365979 bp Feature: gene Location: 1367118-1367528 bp Feature: gene Location: 1367544-1367786 bp Feature: domain Description: Ivy Location: 1367577-1367703 bp Feature: domain Description: Ivy Location: 1 367577-1 367703 bp Feature: gene Location: 2607049-2607534 bp Feature: domain Description: Antirestrict Location: 2607247-2607532 bp Feature: domain Description: Antirestrict Location: 2607247-2607532 bp Feature: gene Location: 2607625-2608038 bp Feature: domain Description: DUF932 Location: 2607628-2608003 bp Feature: domain Description: DUF932 Location: 2607628-2608003 bp Feature: gene Location: 2608184-2609962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2608445-2609240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2608445-2609240 bp Feature: domain Description: Intron_maturas2 Location: 2609366-2609591 bp Feature: domain Description: Intron_maturas2 Location: 2609366-2609591 bp Feature: domain Description: HNHc Note: nucleases Location: 2609786-2609936 bp Feature: domain Description: HNHc Note: nucleases Location: 2609786-2609936 bp Feature: gene Location: 2611236-2614082 bp Feature: domain Description: AidA Location: 2611275-2613237 bp Feature: domain Description: AidA Location: 261 1 275-261 3237 bp Feature: gene Location: 2614454-2615326 bp Feature: domain Description: YeeP Location: 2614457-2615324 bp Feature: domain Description: YeeP Location: 261 4457-261 5324 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), Autotransporter (smart00869), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Antirestrict (pfam03230), RadC (pfam04002), DUF932 (pfam06067), Ivy (pfam08816), AidA (COG3468)
YeeP (COG3596)