myRT

myRT report for GCA_000703385.1_ASM70338v1

Download annotations/find similar RTs

Seq: JNPA01000029.1 (188117 bp)
Overview 1 RT 1: 109260-115825 bp Neighborhood of RT #1 [109260, 116082] AAA_15 RVT-Retrons Nuc_deoxyrib_tr HTH_23 Feature: gene Location: 109260-109391 bp Feature: gene Location: 110199-112445 bp Feature: domain Description: AAA_15 Location: 110202-111210 bp Feature: domain Description: AAA_1 5 Location: 1 1 0202-1 1 1 21 0 bp Feature: gene Location: 112560-113660 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 112743-113271 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 2743-1 1 3271 bp Feature: gene Location: 114316-115185 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 114838-115009 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 1 1 4838-1 1 5009 bp Feature: gene Location: 115606-116082 bp Feature: domain Description: HTH_23 Location: 115684-115825 bp Feature: domain Description: HTH_23 Location: 1 1 5684-1 1 5825 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014), HTH_23 (pfam13384)

Seq: JNPA01000103.1 (31774 bp)
Overview 1 RT 1: 6766-11014 bp Neighborhood of RT #1 [6766, 11016] DUF1380 RVT_N RVT-GII GIIM HNHc PRK13732 Feature: gene Location: 6766-7188 bp Feature: domain Description: DUF1380 Location: 6769-7063 bp Feature: domain Description: DUF1380 Location: 6769-7063 bp Feature: gene Location: 7185-7376 bp Feature: gene Location: 7654-9321 bp Feature: RT Description: RVT_N Location: 7702-7939 bp Feature: RT Description: RVT_N Location: 7702 -7939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7990-8632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7990-8632 bp Feature: domain Description: GIIM Note: maturase Location: 8683-8917 bp Feature: domain Description: GIIM Note: maturase Location: 8683-8917 bp Feature: domain Description: HNHc Note: nucleases Location: 9127-9286 bp Feature: domain Description: HNHc Note: nucleases Location: 912 7-92 86 bp Feature: gene Location: 9983-10105 bp Feature: gene Location: 10489-11016 bp Feature: domain Description: PRK13732 Location: 10492-11014 bp Feature: domain Description: PRK13732 Location: 10492 -11014 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13732 (single-stranded DNA-binding protein; Provisional), DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JNPA01000031.1 (80880 bp)
Overview 1 RT 1: 70225-73818 bp Neighborhood of RT #1 [70225, 73818] AfaD_SafA-like RVT-GII GIIM HTH_28 Feature: gene Location: 70225-70428 bp Feature: domain Description: AfaD_SafA-like Location: 70228-70423 bp Feature: domain Description: AfaD_SafA-like Location: 70228-70423 bp Feature: gene Location: 70502-71023 bp Feature: gene Location: 71443-72831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71773-72391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71773 -723 91 bp Feature: domain Description: GIIM Note: maturase Location: 72439-72670 bp Feature: domain Description: GIIM Note: maturase Location: 7243 9-72670 bp Feature: gene Location: 73117-73407 bp Feature: domain Description: HTH_28 Location: 73162-73285 bp Feature: domain Description: HTH_28 Location: 73 162-73 285 bp Feature: gene Location: 73660-73818 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AfaD_SafA-like (cl38919), RVT-GII, GIIM (pfam08388), HTH_28 (pfam13518)