myRT

myRT report for GCA_000703425.1_ASM70342v1

Download annotations/find similar RTs

Seq: JNPH01000142.1 (2532 bp)
Overview 1 RT 1: 44-2306 bp Neighborhood of RT #1 [44, 2371] RVT-GII GIIM PHA02517 Feature: gene Location: 44-1552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 302-1034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 302-1 034 bp Feature: domain Description: GIIM Note: maturase Location: 1109-1307 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 09-1 307 bp Feature: gene Location: 2159-2371 bp Feature: domain Description: PHA02517 Location: 2162-2306 bp Feature: domain Description: PHA0251 7 Location: 21 62-2306 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JNPH01000076.1 (77866 bp)
Overview 1 RT 1: 51550-55432 bp Neighborhood of RT #1 [51550, 55437] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 51550-52008 bp Feature: domain Description: dut Location: 51556-52003 bp Feature: domain Description: dut Location: 51556-52 003 bp Feature: gene Location: 52115-52711 bp Feature: domain Description: slmA Location: 52121-52697 bp Feature: domain Description: slmA Location: 52 12 1-52 697 bp Feature: gene Location: 52757-53716 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52892-53441 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52 892 -53441 bp Feature: gene Location: 54014-54655 bp Feature: domain Description: pyrE Location: 54017-54650 bp Feature: domain Description: pyrE Location: 54017-54650 bp Feature: gene Location: 54721-55437 bp Feature: domain Description: rph Location: 54724-55432 bp Feature: domain Description: rph Location: 5472 4-55432 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: JNPH01000042.1 (4008 bp)
Overview 1 RT 1: 129-3158 bp Neighborhood of RT #1 [129, 3403] IS5 PHA02517 RVT-GII GIIM Feature: gene Location: 129-1109 bp Feature: domain Description: IS5 Location: 318-1095 bp Feature: domain Description: IS5 Location: 3 18-1095 bp Feature: gene Location: 1332-1718 bp Feature: domain Description: PHA02517 Location: 1335-1716 bp Feature: domain Description: PHA02517 Location: 13 3 5-1716 bp Feature: gene Location: 1895-3403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2153-2885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2153 -2885 bp Feature: domain Description: GIIM Note: maturase Location: 2960-3158 bp Feature: domain Description: GIIM Note: maturase Location: 2960-3 158 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS5 (COG3039), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JNPH01000137.1 (3588 bp)
Overview 1 RT 1: 502-3300 bp Neighborhood of RT #1 [502, 3545] COG4584 PHA02517 RVT-GII GIIM Feature: gene Location: 502-783 bp Feature: domain Description: COG4584 Location: 505-766 bp Feature: domain Description: COG4 584 Location: 505-766 bp Feature: gene Location: 951-1430 bp Feature: domain Description: PHA02517 Location: 1011-1365 bp Feature: domain Description: PHA02517 Location: 1011-1365 bp Feature: gene Location: 2037-3545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2295-3027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2295-3027 bp Feature: domain Description: GIIM Note: maturase Location: 3102-3300 bp Feature: domain Description: GIIM Note: maturase Location: 3102-3300 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG4584 (Transposase ), PHA02517 (putative transposase OrfB; Reviewed)