myRT

myRT report for GCA_000703645.1_ASM70364v1

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Seq: JNPI01000113.1 (60465 bp)
Overview 1 RT 1: 22-9073 bp Neighborhood of RT #1 [22, 9084] InsE Tra5 RVT-UG8 RVT-UG3 INT_Rci_Hp1_C INT_P4_C mutS1 Feature: gene Location: 22-321 bp Ori: KDW15369.1 Feature: domain Description: InsE Location: 49-316 bp Feature: domain Description: InsE Location: 49-31 6 bp Feature: gene Location: 318-1184 bp Ori: KDW15370.1 Feature: domain Description: Tra5 Location: 429-1179 bp Feature: domain Description: Tra5 Location: 429-1 1 79 bp Feature: gene Location: 1623-3641 bp Ori: KDW15371.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2193-2643 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 21 93-2643 bp Feature: gene Location: 3638-4900 bp Ori: KDW15372.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3920-4415 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3920-441 5 bp Feature: gene Location: 4897-6357 bp Ori: KDW15373.1 Feature: domain Description: INT_Rci_Hp1_C Location: 5272-5479 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 5272-5479 bp Feature: domain Description: INT_P4_C Location: 5698-6235 bp Feature: domain Description: INT_P4_C Location: 5698-6235 bp Feature: gene Location: 6517-9084 bp Ori: KDW15374.1 Gene: mutS Feature: domain Description: mutS1 Location: 6553-9073 bp Feature: domain Description: mutS1 Location: 6553-9073 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), Tra5 (COG2801), RVT-UG8, RVT-UG3, INT_Rci_Hp1_C (cd00796), INT_P4_C (cd00801), mutS1 (TIGR01070)

Seq: JNPI01000117.1 (227251 bp)
Overview 1 RT 1: 131441-139760 bp Neighborhood of RT #1 [131441, 139771] Mod Mod ResIII COG3587 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 131441-133069 bp Ori: KDW14748.1 Feature: domain Description: Mod Location: 131558-132044 bp Feature: domain Description: Mod Location: 131558-132 044 bp Feature: domain Description: Mod Location: 132368-132644 bp Feature: domain Description: Mod Location: 132 368-132 644 bp Feature: gene Location: 133072-135942 bp Ori: KDW14749.1 Feature: domain Description: ResIII Location: 133234-133834 bp Feature: domain Description: ResIII Location: 1332 34-133834 bp Feature: domain Description: COG3587 Location: 134263-134461 bp Feature: domain Description: COG3587 Location: 1342 63-134461 bp Feature: gene Location: 136899-138407 bp Ori: KDW14750.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 137157-137889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 137157-137889 bp Feature: domain Description: GIIM Note: maturase Location: 137964-138162 bp Feature: domain Description: GIIM Note: maturase Location: 137964-138162 bp Feature: gene Location: 139014-139256 bp Ori: KDW14751.1 Feature: domain Description: PHA02517 Location: 139017-139191 bp Feature: domain Description: PHA02 517 Location: 139017-139191 bp Feature: gene Location: 139469-139771 bp Ori: KDW14752.1 Feature: domain Description: InsE Location: 139478-139760 bp Feature: domain Description: InsE Location: 139478-139760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mod (COG2189), ResIII (pfam04851), COG3587 (Restriction endonuclease ), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)