myRT

myRT report for GCA_000703665.1_ASM70366v1

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Seq: JNPJ01000107.1 (68081 bp)
Overview 1 RT 1: 55725-60027 bp Neighborhood of RT #1 [55725, 60032] InsE PHA02517 RVT-GII GIIM PHA02517 fruct_sucro_rep Feature: gene Location: 55725-56000 bp Feature: domain Description: InsE Location: 55767-55998 bp Feature: domain Description: InsE Location: 55767-55998 bp Feature: gene Location: 56000-56479 bp Feature: domain Description: PHA02517 Location: 56060-56414 bp Feature: domain Description: PHA0251 7 Location: 56060-5641 4 bp Feature: gene Location: 57086-58594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57344-58076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57344-58076 bp Feature: domain Description: GIIM Note: maturase Location: 58151-58349 bp Feature: domain Description: GIIM Note: maturase Location: 581 51 -58349 bp Feature: gene Location: 58752-58916 bp Feature: domain Description: PHA02517 Location: 58791-58884 bp Feature: domain Description: PHA0251 7 Location: 58791 -58884 bp Feature: gene Location: 59028-60032 bp Feature: domain Description: fruct_sucro_rep Location: 59049-60027 bp Feature: domain Description: fruct_sucro_rep Location: 59049-60027 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), fruct_sucro_rep (TIGR02417)

Seq: JNPJ01000103.1 (75737 bp)
Overview 1 RT 1: 7140-15142 bp Neighborhood of RT #1 [7140, 15399] DUF4917 AAA_15 RVT-Retrons Nuc_deoxyrib_tr HTH_23 Feature: gene Location: 7140-8159 bp Feature: domain Description: DUF4917 Location: 7200-8124 bp Feature: domain Description: DUF4917 Location: 72 00-812 4 bp Feature: gene Location: 9528-11804 bp Feature: domain Description: AAA_15 Location: 9561-10569 bp Feature: domain Description: AAA_15 Location: 9561-10569 bp Feature: gene Location: 11919-13019 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12102-12630 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 102 -12 630 bp Feature: gene Location: 13675-14544 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 14197-14368 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 14197-14368 bp Feature: gene Location: 14965-15399 bp Feature: domain Description: HTH_23 Location: 15001-15142 bp Feature: domain Description: HTH_2 3 Location: 15001-15142 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Nuc_deoxyrib_tr (pfam05014), HTH_23 (pfam13384), DUF4917 (pfam16263), AAA_15 (pfam13175)