myRT

myRT report for GCA_000703805.1_ASM70380v1

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Seq: JNPQ01000076.1 (7573 bp)
Overview 1 RT 1: 3360-7505 bp Neighborhood of RT #1 [3360, 7570] COG3547 PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 3360-4436 bp Feature: domain Description: COG3547 Location: 3399-4320 bp Feature: domain Description: COG3547 Location: 3399-4320 bp Feature: gene Location: 4680-5051 bp Feature: domain Description: PHA02517 Location: 4683-5049 bp Feature: domain Description: PHA0251 7 Location: 4683-5049 bp Feature: gene Location: 5243-6751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5501-6233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5501 -6233 bp Feature: domain Description: GIIM Note: maturase Location: 6308-6506 bp Feature: domain Description: GIIM Note: maturase Location: 6308-6506 bp Feature: gene Location: 6948-7061 bp Feature: gene Location: 7358-7570 bp Feature: domain Description: PHA02517 Location: 7361-7505 bp Feature: domain Description: PHA0251 7 Location: 7361 -7505 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JNPQ01000013.1 (115771 bp)
Overview 1 RT 1: 94084-98633 bp Neighborhood of RT #1 [94084, 98633] TraD PRK13889 RVT-Retrons Feature: gene Location: 94084-94395 bp Feature: domain Description: TraD Location: 94198-94372 bp Feature: domain Description: TraD Location: 94198-94372 bp Feature: gene Location: 95203-96705 bp Feature: domain Description: PRK13889 Location: 95206-95785 bp Feature: domain Description: PRK13889 Location: 952 06-95785 bp Feature: gene Location: 96782-97882 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 96923-97475 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9692 3-97475 bp Feature: gene Location: 98247-98462 bp Feature: gene Location: 98472-98633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraD (pfam06412), PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-Retrons

Seq: JNPQ01000069.1 (9837 bp)
Overview 1 RT 1: 6405-9769 bp Neighborhood of RT #1 [6405, 9834] PRK09413 PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 6405-6590 bp Feature: domain Description: PRK09413 Location: 6408-6588 bp Feature: domain Description: PRK09413 Location: 6408-6588 bp Feature: gene Location: 6950-7342 bp Feature: domain Description: PHA02517 Location: 6956-7334 bp Feature: domain Description: PHA02517 Location: 6956-73 3 4 bp Feature: gene Location: 7507-9015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7765-8497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7765-8497 bp Feature: domain Description: GIIM Note: maturase Location: 8572-8770 bp Feature: domain Description: GIIM Note: maturase Location: 8572-8770 bp Feature: gene Location: 9212-9325 bp Feature: gene Location: 9622-9834 bp Feature: domain Description: PHA02517 Location: 9625-9769 bp Feature: domain Description: PHA02517 Location: 9625-9769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09413 (IS2 repressor TnpA; Reviewed), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JNPQ01000055.1 (18713 bp)
Overview 1 RT 1: 46-2575 bp Neighborhood of RT #1 [46, 2640] RVT-GII GIIM PHA02517 Feature: gene Location: 46-1554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 304-1036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 304 -1036 bp Feature: domain Description: GIIM Note: maturase Location: 1111-1309 bp Feature: domain Description: GIIM Note: maturase Location: 1111-1309 bp Feature: gene Location: 1751-1864 bp Feature: gene Location: 2161-2640 bp Feature: domain Description: PHA02517 Location: 2221-2575 bp Feature: domain Description: PHA02517 Location: 2221-2575 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JNPQ01000070.1 (9829 bp)
Overview 1 RT 1: 46-2575 bp Neighborhood of RT #1 [46, 2640] RVT-GII GIIM PHA02517 Feature: gene Location: 46-1554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 304-1036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 304-1036 bp Feature: domain Description: GIIM Note: maturase Location: 1111-1309 bp Feature: domain Description: GIIM Note: maturase Location: 1111-1309 bp Feature: gene Location: 1751-1864 bp Feature: gene Location: 2161-2640 bp Feature: domain Description: PHA02517 Location: 2221-2575 bp Feature: domain Description: PHA025 17 Location: 2221-25 75 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)