myRT

myRT report for GCA_000703865.1_ASM70386v1

Download annotations/find similar RTs

Seq: JNPT01000056.1 (17371 bp)
Overview 1 RT 1: 8720-12103 bp Neighborhood of RT #1 [8720, 12168] RVT-GII GIIM PHA02517 Feature: gene Location: 8720-8977 bp Feature: gene Location: 9299-9433 bp Feature: gene Location: 9628-11136 bp Ori: KDW69630.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9886-10618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9886-1 061 8 bp Feature: domain Description: GIIM Note: maturase Location: 10693-10891 bp Feature: domain Description: GIIM Note: maturase Location: 1 0693-1 0891 bp Feature: gene Location: 11175-11297 bp Feature: gene Location: 11743-12168 bp Ori: KDW69632.1 Feature: domain Description: PHA02517 Location: 11767-12103 bp Feature: domain Description: PHA0251 7 Location: 1 1 767-1 21 03 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JNPT01000024.1 (85074 bp)
Overview 1 RT 1: 19045-22808 bp Neighborhood of RT #1 [19045, 22813] PRK09413 RVT-GII GIIM PinE Feature: gene Location: 19045-19164 bp Feature: gene Location: 19521-19718 bp Ori: KDW71767.1 Feature: domain Description: PRK09413 Location: 19524-19686 bp Feature: domain Description: PRK09413 Location: 1952 4-19686 bp Feature: gene Location: 20194-21546 bp Ori: KDW71768.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20515-21133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0515-2 1133 bp Feature: domain Description: GIIM Note: maturase Location: 21181-21412 bp Feature: domain Description: GIIM Note: maturase Location: 2 1181-2 1412 bp Feature: gene Location: 21755-22156 bp Feature: gene Location: 22256-22813 bp Ori: KDW71770.1 Gene: tnpR Feature: domain Description: PinE Location: 22259-22808 bp Feature: domain Description: PinE Location: 2 2 2 59-2 2 808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09413 (IS2 repressor TnpA; Reviewed), RVT-GII, GIIM (pfam08388), PinE (COG1961)

Seq: JNPT01000008.1 (167396 bp)
Overview 1 RT 1: 23139-29170 bp Neighborhood of RT #1 [23139, 29307] SfsB RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 23139-23279 bp Ori: KDW74744.1 Feature: domain Description: SfsB Location: 23148-23220 bp Feature: domain Description: SfsB Location: 23 148-23 220 bp Feature: gene Location: 23276-23746 bp Feature: gene Location: 24093-27302 bp Ori: KDW74746.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24621-25110 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24621-25110 bp Feature: domain Description: nitrilase Location: 26616-27213 bp Feature: domain Description: nitrilase Location: 26616-27213 bp Feature: gene Location: 27618-28400 bp Ori: KDW74747.1 Feature: domain Description: AbiEi_3_N Location: 27630-27891 bp Feature: domain Description: AbiEi_3 _N Location: 2763 0-27891 bp Feature: domain Description: AbiEi_3 Location: 27903-28359 bp Feature: domain Description: AbiEi_3 Location: 27903 -283 59 bp Feature: gene Location: 28387-29307 bp Ori: KDW74748.1 Feature: domain Description: AbiEii Location: 28429-29170 bp Feature: domain Description: AbiEii Location: 28429-29170 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SfsB (COG3423), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)